contig: FAM19038-p1-1.1_scf1 genome: FAM19038-p1-1.1
species: Acidipropionibacterium thoenii DSM 20276 taxid: 1122998

Metadata

Contig type Scaffold
Is Circular Yes
Is Plasmid No
GC-content 68.7 %
Length 2999408 bp
Gene count 2686

Genes on this contig

Gene ID Product Gene code Start ↑ End Length Strand
FAM19038-p1-1.1_000801 cation transporter 916553 917554 1001 reverse
FAM19038-p1-1.1_000802 transporter substrate-binding domain-containing protein 917551 918042 491 reverse
FAM19038-p1-1.1_000803 hypothetical protein 918415 918615 200 forward
FAM19038-p1-1.1_000804 SDR family oxidoreductase 918698 919597 899 forward
FAM19038-p1-1.1_000805 FAD-dependent oxidoreductase 919679 920881 1202 forward
FAM19038-p1-1.1_000806 FAD-dependent oxidoreductase 920922 921362 440 reverse
FAM19038-p1-1.1_000807 IS256 family transposase 921519 922778 1259 forward
FAM19038-p1-1.1_000808 FAD-dependent oxidoreductase 922794 923729 935 reverse
FAM19038-p1-1.1_000809 helix-turn-helix transcriptional regulator 923726 924004 278 reverse
FAM19038-p1-1.1_000810 acyl-CoA desaturase 924292 925476 1184 reverse
FAM19038-p1-1.1_000811 response regulator transcription factor 925821 926471 650 forward
FAM19038-p1-1.1_000812 GlsB/YeaQ/YmgE family stress response membrane protein 926644 926925 281 reverse
FAM19038-p1-1.1_000813 transketolase 927071 929032 1961 reverse
FAM19038-p1-1.1_000814 MHS family MFS transporter 929381 930745 1364 forward
FAM19038-p1-1.1_000815 siderophore-interacting protein 930821 931678 857 forward
FAM19038-p1-1.1_000816 response regulator transcription factor 931806 932459 653 forward
FAM19038-p1-1.1_000817 hypothetical protein 932545 932754 209 reverse
FAM19038-p1-1.1_000818 GlsB/YeaQ/YmgE family stress response membrane protein 932871 933149 278 reverse
FAM19038-p1-1.1_000819 transketolase 933332 935389 2057 reverse
FAM19038-p1-1.1_000820 thiamine phosphate synthase 935702 936358 656 reverse
FAM19038-p1-1.1_000821 hydroxyethylthiazole kinase 936369 937262 893 reverse
FAM19038-p1-1.1_000822 MHS family MFS transporter 937259 938680 1421 reverse
FAM19038-p1-1.1_000823 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 938815 940518 1703 reverse
FAM19038-p1-1.1_000824 undecaprenyl-diphosphate phosphatase 940747 941616 869 reverse
FAM19038-p1-1.1_000825 50S ribosomal protein L9 GC:rplI 942025 942471 446 reverse
FAM19038-p1-1.1_000826 30S ribosomal protein S18 942486 942725 239 reverse
FAM19038-p1-1.1_000827 single-stranded DNA-binding protein 942867 943520 653 reverse
FAM19038-p1-1.1_000828 30S ribosomal protein S6 GC:rpsF 943666 943956 290 reverse
FAM19038-p1-1.1_000829 deferrochelatase/peroxidase EfeB GC:efeB 944672 946147 1475 reverse
FAM19038-p1-1.1_000830 peptidase M75 family protein 946189 947484 1295 reverse
FAM19038-p1-1.1_000831 iron transporter 947625 948644 1019 reverse
FAM19038-p1-1.1_000832 rhodanese-like domain-containing protein 949478 949858 380 reverse
FAM19038-p1-1.1_000833 long-chain fatty acid--CoA ligase 949952 952171 2219 reverse
FAM19038-p1-1.1_000834 deoxyribonuclease IV 952271 953068 797 reverse
FAM19038-p1-1.1_000835 SDR family NAD(P)-dependent oxidoreductase 953180 954022 842 forward
FAM19038-p1-1.1_000836 1-acyl-sn-glycerol-3-phosphate acyltransferase 954025 954864 839 forward
FAM19038-p1-1.1_000837 GyrI-like domain-containing protein 954908 955390 482 forward
FAM19038-p1-1.1_000838 aminoacyltransferase 955573 956757 1184 forward
FAM19038-p1-1.1_000839 alanine racemase 956754 957815 1061 forward
FAM19038-p1-1.1_000840 FAD-dependent oxidoreductase 958059 959282 1223 forward
FAM19038-p1-1.1_000841 DUF4186 domain-containing protein 959357 959806 449 forward
FAM19038-p1-1.1_000842 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme 960124 961377 1253 forward
FAM19038-p1-1.1_000843 FAD-binding protein 961520 962917 1397 forward
FAM19038-p1-1.1_000844 histidine kinase 963168 964220 1052 forward
FAM19038-p1-1.1_000845 response regulator transcription factor 964182 964778 596 reverse
FAM19038-p1-1.1_000846 hypothetical protein 965223 965474 251 reverse
FAM19038-p1-1.1_000847 ABC transporter ATP-binding protein 965559 966260 701 forward
FAM19038-p1-1.1_000848 hypothetical protein 966257 967921 1664 forward
FAM19038-p1-1.1_000849 hypothetical protein 967997 968137 140 reverse
FAM19038-p1-1.1_000850 histidine kinase 968248 969351 1103 forward
FAM19038-p1-1.1_000851 anaerobic glycerol-3-phosphate dehydrogenase subunit C 969664 970917 1253 reverse
FAM19038-p1-1.1_000852 glycerol-3-phosphate dehydrogenase subunit GlpB GC:glpB 970919 972274 1355 reverse
FAM19038-p1-1.1_000853 anaerobic glycerol-3-phosphate dehydrogenase subunit A GC:glpA 972271 973896 1625 reverse
FAM19038-p1-1.1_000854 D-glycerate dehydrogenase 974168 975130 962 reverse
FAM19038-p1-1.1_000855 amino acid permease GC:pseudo-gene 975229 976563 1334 reverse
FAM19038-p1-1.1_000856 MarR family transcriptional regulator 976897 977376 479 reverse
FAM19038-p1-1.1_000857 YceI family protein 977511 978056 545 forward
FAM19038-p1-1.1_000858 transposase GC:pseudo-gene 978974 979450 476 reverse
FAM19038-p1-1.1_000859 transposase 979531 979818 287 forward
FAM19038-p1-1.1_000860 IS3 family transposase 979809 980699 890 forward
FAM19038-p1-1.1_000861 ISL3-like element ISPfr1 family transposase GC:pseudo-gene 980742 981350 608 reverse
FAM19038-p1-1.1_000862 DNA repair exonuclease 981670 982839 1169 forward
FAM19038-p1-1.1_000863 AAA family ATPase 982836 985700 2864 forward
FAM19038-p1-1.1_000864 GNAT family N-acetyltransferase 985985 986449 464 reverse
FAM19038-p1-1.1_000865 MATE family efflux transporter 986994 988325 1331 reverse
FAM19038-p1-1.1_000866 TetR/AcrR family transcriptional regulator 988322 989017 695 reverse
FAM19038-p1-1.1_000867 sugar kinase 989253 990353 1100 forward
FAM19038-p1-1.1_000868 Cys-tRNA(Pro) deacylase GC:ybaK 990486 990983 497 forward
FAM19038-p1-1.1_000869 hypothetical protein 990985 991359 374 reverse
FAM19038-p1-1.1_000870 hypothetical protein 991540 992025 485 reverse
FAM19038-p1-1.1_000871 GlcNAc-PI de-N-acetylase 992022 993023 1001 reverse
FAM19038-p1-1.1_000872 L-D-transpeptidase 993100 993522 422 reverse
FAM19038-p1-1.1_000873 carbohydrate kinase 994127 995062 935 forward
FAM19038-p1-1.1_000874 NAD(+) synthase 995114 997333 2219 forward
FAM19038-p1-1.1_000875 hypothetical protein 997738 998703 965 forward
FAM19038-p1-1.1_000876 YeeE/YedE family protein 999492 1000574 1082 forward
FAM19038-p1-1.1_000877 sulfurtransferase TusA family protein 1000762 1000986 224 forward
FAM19038-p1-1.1_000878 ATP-binding cassette domain-containing protein 1001217 1003751 2534 forward
FAM19038-p1-1.1_000879 protein kinase 1003803 1005578 1775 forward
FAM19038-p1-1.1_000880 hypothetical protein 1005762 1007384 1622 forward
FAM19038-p1-1.1_000881 6-phosphofructokinase 1007509 1009746 2237 forward
FAM19038-p1-1.1_000882 alpha/beta hydrolase 1009899 1010837 938 forward
FAM19038-p1-1.1_000883 HAMP domain-containing histidine kinase 1010874 1011704 830 forward
FAM19038-p1-1.1_000884 response regulator transcription factor 1011701 1012402 701 forward
FAM19038-p1-1.1_000885 ABC transporter substrate-binding protein 1012399 1013484 1085 forward
FAM19038-p1-1.1_000886 iron ABC transporter permease 1013481 1015079 1598 forward
FAM19038-p1-1.1_000887 ABC transporter ATP-binding protein 1015072 1016244 1172 forward
FAM19038-p1-1.1_000888 MFS transporter 1016521 1017924 1403 forward
FAM19038-p1-1.1_000889 SOS response-associated peptidase 1018108 1018872 764 forward
FAM19038-p1-1.1_000890 hypothetical protein 1019043 1019213 170 reverse
FAM19038-p1-1.1_000891 hypothetical protein 1019429 1020217 788 reverse
FAM19038-p1-1.1_000892 L-D-transpeptidase 1020209 1021666 1457 forward
FAM19038-p1-1.1_000893 septal ring lytic transglycosylase RlpA family protein 1021839 1022954 1115 forward
FAM19038-p1-1.1_000894 citrate synthase 1023383 1024666 1283 forward
FAM19038-p1-1.1_000895 adenosine deaminase 1025680 1026750 1070 forward
FAM19038-p1-1.1_000896 DUF5596 domain-containg protein 1027058 1027987 929 reverse
FAM19038-p1-1.1_000897 alpha-L-fucosidase 1028005 1029330 1325 reverse
FAM19038-p1-1.1_000898 NAD(P)-binding domain-containing protein 1029652 1030299 647 reverse
FAM19038-p1-1.1_000899 PFL family protein 1030741 1032105 1364 reverse
FAM19038-p1-1.1_000900 ACT domain-containing protein 1032125 1032394 269 reverse