contig: FAM19038-p1-1.1_scf1 genome: FAM19038-p1-1.1
species: Acidipropionibacterium thoenii DSM 20276 taxid: 1122998

Metadata

Contig type Scaffold
Is Circular Yes
Is Plasmid No
GC-content 68.7 %
Length 2999408 bp
Gene count 2686

Genes on this contig

Gene ID Product Gene code Start ↑ End Length Strand
FAM19038-p1-1.1_000701 ATP-dependent helicase HrpB GC:hrpB 780444 783122 2678 reverse
FAM19038-p1-1.1_000702 NUDIX domain-containing protein 783119 783730 611 reverse
FAM19038-p1-1.1_000703 NAD(P)/FAD-dependent oxidoreductase 783946 785325 1379 forward
FAM19038-p1-1.1_000704 sulfurtransferase 785522 786355 833 reverse
FAM19038-p1-1.1_000705 hypothetical protein 786528 786773 245 forward
FAM19038-p1-1.1_000706 hypothetical protein 786941 788422 1481 forward
FAM19038-p1-1.1_000707 VCBS repeat-containing protein 788673 789743 1070 forward
FAM19038-p1-1.1_000708 glycosyltransferase family 4 protein 789864 790982 1118 reverse
FAM19038-p1-1.1_000709 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) GC:wecB 790992 792065 1073 reverse
FAM19038-p1-1.1_000710 glycosyltransferase family 4 protein 792198 793298 1100 reverse
FAM19038-p1-1.1_000711 O-antigen ligase family protein 793362 794687 1325 reverse
FAM19038-p1-1.1_000712 nucleotide sugar dehydrogenase 794709 796007 1298 reverse
FAM19038-p1-1.1_000713 amino acid ABC transporter ATP-binding protein 796364 797146 782 forward
FAM19038-p1-1.1_000714 glutamate ABC transporter substrate-binding protein 797328 798173 845 forward
FAM19038-p1-1.1_000715 amino acid ABC transporter permease 798285 798968 683 forward
FAM19038-p1-1.1_000716 amino acid ABC transporter permease 798965 799906 941 forward
FAM19038-p1-1.1_000717 1-phosphofructokinase family hexose kinase 799989 801080 1091 forward
FAM19038-p1-1.1_000718 HPr family phosphocarrier protein 801159 801416 257 forward
FAM19038-p1-1.1_000719 hypothetical protein 801690 802649 959 reverse
FAM19038-p1-1.1_000720 hypothetical protein 803110 804615 1505 reverse
FAM19038-p1-1.1_000721 Gfo/Idh/MocA family oxidoreductase 804907 805899 992 reverse
FAM19038-p1-1.1_000722 DegT/DnrJ/EryC1/StrS family aminotransferase 805901 807013 1112 reverse
FAM19038-p1-1.1_000723 N-acetyltransferase 807159 807770 611 reverse
FAM19038-p1-1.1_000724 chain-length determining protein 808063 808869 806 forward
FAM19038-p1-1.1_000725 O-antigen ligase family protein 808774 810171 1397 reverse
FAM19038-p1-1.1_000726 glycosyltransferase family 4 protein 810217 811383 1166 reverse
FAM19038-p1-1.1_000727 glycosyltransferase 811588 812889 1301 forward
FAM19038-p1-1.1_000728 O-antigen ligase family protein 812808 814214 1406 reverse
FAM19038-p1-1.1_000729 IS256 family transposase 814865 816124 1259 reverse
FAM19038-p1-1.1_000730 hypothetical protein 816570 817715 1145 reverse
FAM19038-p1-1.1_000731 hypothetical protein GC:pseudo-gene 817904 819241 1337 reverse
FAM19038-p1-1.1_000732 penicillin-binding protein 819363 821684 2321 reverse
FAM19038-p1-1.1_000733 DUF5318 domain-containing protein 821677 822096 419 reverse
FAM19038-p1-1.1_000734 insulinase family protein 822274 823710 1436 forward
FAM19038-p1-1.1_000735 insulinase family protein 823707 825077 1370 forward
FAM19038-p1-1.1_000736 tRNA-Ala 825190 825265 75 forward
FAM19038-p1-1.1_000737 hypothetical protein 825510 825866 356 reverse
FAM19038-p1-1.1_000738 DUF222 domain-containing protein 826713 828629 1916 reverse
FAM19038-p1-1.1_000739 AAA family ATPase 829029 829466 437 reverse
FAM19038-p1-1.1_000740 TfoX/Sxy family protein 829593 829934 341 forward
FAM19038-p1-1.1_000741 hypothetical protein 830324 830473 149 forward
FAM19038-p1-1.1_000742 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme 830657 831877 1220 forward
FAM19038-p1-1.1_000743 calcium:proton antiporter 832008 833228 1220 reverse
FAM19038-p1-1.1_000744 cytochrome P450 833585 834826 1241 reverse
FAM19038-p1-1.1_000745 lycopene cyclase domain-containing protein 835124 835531 407 forward
FAM19038-p1-1.1_000746 lycopene cyclase domain-containing protein 835524 835835 311 forward
FAM19038-p1-1.1_000747 FAD-dependent oxidoreductase 835832 837469 1637 forward
FAM19038-p1-1.1_000748 MarR family transcriptional regulator 837483 838055 572 reverse
FAM19038-p1-1.1_000749 polyprenyl synthetase family protein 838210 839328 1118 forward
FAM19038-p1-1.1_000750 squalene/phytoene synthase family protein 839325 840278 953 forward
FAM19038-p1-1.1_000751 phytoene desaturase GC:crtI 840275 842119 1844 forward
FAM19038-p1-1.1_000752 ferrochelatase 842125 843333 1208 forward
FAM19038-p1-1.1_000753 DUF1731 domain-containing protein 843451 844965 1514 forward
FAM19038-p1-1.1_000754 low temperature requirement protein A GC:pseudo-gene 845145 846303 1158 forward
FAM19038-p1-1.1_000755 hypothetical protein 846211 847395 1184 reverse
FAM19038-p1-1.1_000756 DUF697 domain-containing protein 847557 848711 1154 reverse
FAM19038-p1-1.1_000757 DNA polymerase III subunit epsilon 848828 849541 713 reverse
FAM19038-p1-1.1_000758 GNAT family N-acetyltransferase 849629 850162 533 forward
FAM19038-p1-1.1_000759 CsbD family protein 850296 850508 212 forward
FAM19038-p1-1.1_000760 Hsp20/alpha crystallin family protein 850844 851362 518 forward
FAM19038-p1-1.1_000761 hydroxyacid dehydrogenase 851651 852577 926 forward
FAM19038-p1-1.1_000762 hypothetical protein 852645 852854 209 reverse
FAM19038-p1-1.1_000763 copper-translocating P-type ATPase 853025 855361 2336 reverse
FAM19038-p1-1.1_000764 hypothetical protein 855430 855735 305 reverse
FAM19038-p1-1.1_000765 multicopper oxidase family protein 855911 857389 1478 reverse
FAM19038-p1-1.1_000766 HAMP domain-containing histidine kinase 857425 858480 1055 reverse
FAM19038-p1-1.1_000767 response regulator transcription factor 858564 859259 695 reverse
FAM19038-p1-1.1_000768 permease 859291 859998 707 reverse
FAM19038-p1-1.1_000769 ATP-binding protein 860230 861045 815 reverse
FAM19038-p1-1.1_000770 IS21 family transposase 861042 862709 1667 reverse
FAM19038-p1-1.1_000771 AraC family transcriptional regulator 862903 863778 875 reverse
FAM19038-p1-1.1_000772 VOC family protein 863857 864369 512 forward
FAM19038-p1-1.1_000773 alanine dehydrogenase GC:ald 864639 865754 1115 forward
FAM19038-p1-1.1_000774 carbohydrate kinase family protein 865845 866918 1073 forward
FAM19038-p1-1.1_000775 VOC family protein 867536 868117 581 forward
FAM19038-p1-1.1_000776 pyrroline-5-carboxylate reductase GC:proC 868137 868931 794 forward
FAM19038-p1-1.1_000777 hypothetical protein 869292 870269 977 forward
FAM19038-p1-1.1_000778 replication-associated recombination protein A GC:pseudo-gene 870547 871888 1341 reverse
FAM19038-p1-1.1_000779 IS630 family transposase 872726 873841 1115 reverse
FAM19038-p1-1.1_000780 ATP-binding protein 873879 875369 1490 reverse
FAM19038-p1-1.1_000781 AAA family ATPase 875366 877675 2309 reverse
FAM19038-p1-1.1_000782 DEAD/DEAH box helicase 877680 884399 6719 reverse
FAM19038-p1-1.1_000783 class I SAM-dependent DNA methyltransferase 884396 889183 4787 reverse
FAM19038-p1-1.1_000784 DEAD/DEAH box helicase 889183 892080 2897 reverse
FAM19038-p1-1.1_000785 hypothetical protein 892666 893607 941 reverse
FAM19038-p1-1.1_000786 AAA domain-containing protein 893582 895501 1919 reverse
FAM19038-p1-1.1_000787 hypothetical protein 895887 897137 1250 forward
FAM19038-p1-1.1_000788 AAA domain-containing protein 897194 899365 2171 forward
FAM19038-p1-1.1_000789 5-methylcytosine-specific restriction endonuclease system specificity protein McrC GC:mcrC 899362 900414 1052 forward
FAM19038-p1-1.1_000790 biotin transporter BioY 900869 901528 659 forward
FAM19038-p1-1.1_000791 long-chain fatty acid--CoA ligase 901525 902616 1091 forward
FAM19038-p1-1.1_000792 thiolase family protein 902613 903764 1151 forward
FAM19038-p1-1.1_000793 6-phospho-beta-glucosidase 903929 905230 1301 reverse
FAM19038-p1-1.1_000794 polyphosphate kinase 2 GC:ppk2 905593 906393 800 forward
FAM19038-p1-1.1_000795 C69 family dipeptidase 906835 908484 1649 reverse
FAM19038-p1-1.1_000796 CHAP domain-containing protein 908697 910067 1370 forward
FAM19038-p1-1.1_000797 hypothetical protein 910087 911001 914 reverse
FAM19038-p1-1.1_000798 SMP-30/gluconolactonase/LRE family protein 911207 912166 959 reverse
FAM19038-p1-1.1_000799 IS1380 family transposase 912410 913801 1391 forward
FAM19038-p1-1.1_000800 catalase 914377 916497 2120 forward