contig: FAM19038-p1-1.1_scf1 genome: FAM19038-p1-1.1
species: Acidipropionibacterium thoenii DSM 20276 taxid: 1122998

Metadata

Contig type Scaffold
Is Circular Yes
Is Plasmid No
GC-content 68.7 %
Length 2999408 bp
Gene count 2686

Genes on this contig

Gene ID Product Gene code Start ↑ End Length Strand
FAM19038-p1-1.1_002600 DNA polymerase III subunit delta 2904808 2905833 1025 reverse
FAM19038-p1-1.1_002601 DEAD/DEAH box helicase family protein 2905860 2907569 1709 reverse
FAM19038-p1-1.1_002602 MBL fold metallo-hydrolase 2907671 2910046 2375 reverse
FAM19038-p1-1.1_002603 ComEA family DNA-binding protein 2910033 2910671 638 reverse
FAM19038-p1-1.1_002604 leucine--tRNA ligase 2911114 2913600 2486 reverse
FAM19038-p1-1.1_002605 DUF4192 family protein 2913688 2914734 1046 reverse
FAM19038-p1-1.1_002606 glucoamylase 2914875 2915477 602 forward
FAM19038-p1-1.1_002607 DUF3459 domain-containing protein 2915569 2916831 1262 reverse
FAM19038-p1-1.1_002608 cadmium-translocating P-type ATPase GC:cadA 2916997 2919003 2006 forward
FAM19038-p1-1.1_002609 DUF1801 domain-containing protein 2919065 2919472 407 forward
FAM19038-p1-1.1_002610 hydroxyethylthiazole kinase GC:thiM 2919660 2920481 821 forward
FAM19038-p1-1.1_002611 thiamine phosphate synthase GC:thiE 2920481 2921152 671 forward
FAM19038-p1-1.1_002612 helix-turn-helix transcriptional regulator 2921161 2921820 659 reverse
FAM19038-p1-1.1_002613 L-lactate permease 2921879 2923288 1409 forward
FAM19038-p1-1.1_002614 ADP-ribosylglycohydrolase family protein 2923307 2924440 1133 reverse
FAM19038-p1-1.1_002615 TetR/AcrR family transcriptional regulator 2924550 2925332 782 reverse
FAM19038-p1-1.1_002616 ATP-binding cassette domain-containing protein 2925378 2926382 1004 forward
FAM19038-p1-1.1_002617 ABC transporter permease 2926385 2927206 821 forward
FAM19038-p1-1.1_002618 ISL3 family transposase 2927418 2928725 1307 forward
FAM19038-p1-1.1_002619 hypothetical protein 2928825 2929604 779 forward
FAM19038-p1-1.1_002620 ATP-binding protein 2929601 2931091 1490 forward
FAM19038-p1-1.1_002621 helix-turn-helix domain-containing protein 2931257 2931862 605 forward
FAM19038-p1-1.1_002622 hypothetical protein 2931855 2932580 725 forward
FAM19038-p1-1.1_002623 EamA family transporter 2932616 2933482 866 forward
FAM19038-p1-1.1_002624 hypothetical protein GC:pseudo-gene 2933479 2933826 347 forward
FAM19038-p1-1.1_002625 dihydrodipicolinate synthase family protein 2933823 2934728 905 forward
FAM19038-p1-1.1_002626 MFS transporter 2934799 2935917 1118 forward
FAM19038-p1-1.1_002627 hypothetical protein 2935867 2936427 560 reverse
FAM19038-p1-1.1_002628 transposase 2936678 2936965 287 forward
FAM19038-p1-1.1_002629 IS3 family transposase 2937019 2937366 347 forward
FAM19038-p1-1.1_002630 IS3 family transposase 2937368 2937847 479 forward
FAM19038-p1-1.1_002631 hypothetical protein 2937830 2939209 1379 reverse
FAM19038-p1-1.1_002632 helix-turn-helix transcriptional regulator 2939269 2939595 326 reverse
FAM19038-p1-1.1_002633 tyrosine-type recombinase/integrase 2939603 2940685 1082 reverse
FAM19038-p1-1.1_002634 hypothetical protein 2940888 2941418 530 forward
FAM19038-p1-1.1_002635 TraM recognition domain-containing protein 2941415 2943196 1781 forward
FAM19038-p1-1.1_002636 single-stranded DNA-binding protein 2943286 2943744 458 forward
FAM19038-p1-1.1_002637 hypothetical protein 2943764 2944345 581 forward
FAM19038-p1-1.1_002638 hypothetical protein 2944351 2944551 200 forward
FAM19038-p1-1.1_002639 recombinase family protein 2944695 2946167 1472 forward
FAM19038-p1-1.1_002640 IS1634 family transposase 2946063 2947706 1643 reverse
FAM19038-p1-1.1_002641 hypothetical protein 2947738 2948100 362 reverse
FAM19038-p1-1.1_002642 EcsC family protein 2948578 2949627 1049 reverse
FAM19038-p1-1.1_002643 IS256 family transposase 2949699 2950958 1259 reverse
FAM19038-p1-1.1_002644 TIR domain-containing protein 2951260 2952093 833 reverse
FAM19038-p1-1.1_002645 type I restriction endonuclease subunit R 2952090 2955032 2942 reverse
FAM19038-p1-1.1_002646 ImmA/IrrE family metallo-endopeptidase 2955029 2956099 1070 reverse
FAM19038-p1-1.1_002647 plasmid maintenance system killer protein 2956111 2956404 293 reverse
FAM19038-p1-1.1_002648 restriction endonuclease subunit S 2956456 2957811 1355 reverse
FAM19038-p1-1.1_002649 SAM-dependent DNA methyltransferase 2957811 2959781 1970 reverse
FAM19038-p1-1.1_002650 TetR/AcrR family transcriptional regulator 2960011 2960607 596 forward
FAM19038-p1-1.1_002651 recombinase family protein GC:pseudo-gene 2961041 2962570 1529 forward
FAM19038-p1-1.1_002652 tRNA-Ala 2962668 2962743 75 reverse
FAM19038-p1-1.1_002653 tRNA-Ala 2962786 2962858 72 reverse
FAM19038-p1-1.1_002654 histidine phosphatase family protein 2962950 2963597 647 reverse
FAM19038-p1-1.1_002655 ribosome silencing factor GC:rsfS 2963594 2963977 383 reverse
FAM19038-p1-1.1_002656 nicotinate-nucleotide adenylyltransferase 2963974 2964636 662 reverse
FAM19038-p1-1.1_002657 glutamate-5-semialdehyde dehydrogenase 2964785 2966029 1244 reverse
FAM19038-p1-1.1_002658 glutamate 5-kinase 2966063 2967310 1247 reverse
FAM19038-p1-1.1_002659 GTPase ObgE GC:obgE 2967300 2968826 1526 reverse
FAM19038-p1-1.1_002660 hypothetical protein 2968890 2969888 998 reverse
FAM19038-p1-1.1_002661 50S ribosomal protein L27 GC:rpmA 2970190 2970459 269 reverse
FAM19038-p1-1.1_002662 50S ribosomal protein L21 GC:rplU 2970472 2970780 308 reverse
FAM19038-p1-1.1_002663 Rne/Rng family ribonuclease 2970953 2973715 2762 reverse
FAM19038-p1-1.1_002664 glycoside hydrolase family 3 protein 2973917 2975557 1640 reverse
FAM19038-p1-1.1_002665 nucleoside-diphosphate kinase GC:ndk 2975554 2975991 437 reverse
FAM19038-p1-1.1_002666 DUF4233 domain-containing protein 2976015 2976338 323 reverse
FAM19038-p1-1.1_002667 bifunctional folylpolyglutamate synthase/dihydrofolate synthase 2976377 2977804 1427 reverse
FAM19038-p1-1.1_002668 RNA polymerase-binding protein RbpA 2977837 2978193 356 reverse
FAM19038-p1-1.1_002669 preprotein translocase subunit SecG GC:secG 2978256 2978498 242 reverse
FAM19038-p1-1.1_002670 triose-phosphate isomerase 2978610 2979389 779 reverse
FAM19038-p1-1.1_002671 phosphoglycerate kinase 2979389 2980597 1208 reverse
FAM19038-p1-1.1_002672 type I glyceraldehyde-3-phosphate dehydrogenase GC:gap 2980726 2981733 1007 reverse
FAM19038-p1-1.1_002673 DNA-binding protein WhiA GC:whiA 2981882 2982868 986 reverse
FAM19038-p1-1.1_002674 uridine diphosphate-N-acetylglucosamine-binding protein YvcK GC:yvcK 2982938 2983903 965 reverse
FAM19038-p1-1.1_002675 RNase adapter RapZ GC:rapZ 2983957 2984847 890 reverse
FAM19038-p1-1.1_002676 excinuclease ABC subunit UvrC GC:uvrC 2984876 2986891 2015 reverse
FAM19038-p1-1.1_002677 histidine phosphatase family protein 2987141 2987890 749 forward
FAM19038-p1-1.1_002678 hypothetical protein 2987902 2988390 488 reverse
FAM19038-p1-1.1_002679 Rieske (2Fe-2S) protein 2988723 2989133 410 forward
FAM19038-p1-1.1_002680 hypothetical protein 2989221 2989574 353 reverse
FAM19038-p1-1.1_002681 excinuclease ABC subunit UvrA GC:uvrA 2989664 2992693 3029 reverse
FAM19038-p1-1.1_002682 maleylpyruvate isomerase family mycothiol-dependent enzyme 2992791 2993531 740 forward
FAM19038-p1-1.1_002683 TerC/Alx family metal homeostasis membrane protein 2993520 2994521 1001 reverse
FAM19038-p1-1.1_002684 excinuclease ABC subunit UvrB GC:uvrB 2994703 2996787 2084 reverse
FAM19038-p1-1.1_002685 dephospho-CoA kinase 2996824 2997456 632 reverse
FAM19038-p1-1.1_002686 30S ribosomal protein S1 GC:rpsA 2997539 2999041 1502 reverse