contig: FAM19038-p1-1.1_scf1 genome: FAM19038-p1-1.1
species: Acidipropionibacterium thoenii DSM 20276 taxid: 1122998

Metadata

Contig type Scaffold
Is Circular Yes
Is Plasmid No
GC-content 68.7 %
Length 2999408 bp
Gene count 2686

Genes on this contig

Gene ID Product Gene code Start ↑ End Length Strand
FAM19038-p1-1.1_000901 GNAT family N-acetyltransferase 1032799 1033326 527 reverse
FAM19038-p1-1.1_000902 N-acetylmuramic acid 6-phosphate etherase GC:murQ 1033347 1034426 1079 reverse
FAM19038-p1-1.1_000903 hypothetical protein 1034693 1035823 1130 forward
FAM19038-p1-1.1_000904 penicillin-binding protein 1036212 1038158 1946 forward
FAM19038-p1-1.1_000905 mechanosensitive ion channel family protein 1038202 1039074 872 forward
FAM19038-p1-1.1_000906 glycerate kinase 1039255 1040394 1139 reverse
FAM19038-p1-1.1_000907 CCA tRNA nucleotidyltransferase 1040951 1042498 1547 forward
FAM19038-p1-1.1_000908 peptidase C39 family protein 1042582 1043985 1403 forward
FAM19038-p1-1.1_000909 hypothetical protein 1044235 1046412 2177 forward
FAM19038-p1-1.1_000910 serine/threonine protein kinase 1046593 1048770 2177 forward
FAM19038-p1-1.1_000911 RNA polymerase sigma factor SigM GC:sigM 1048878 1049432 554 forward
FAM19038-p1-1.1_000912 hypothetical protein 1049651 1049938 287 forward
FAM19038-p1-1.1_000913 glycerol kinase GlpK GC:glpK 1050334 1051863 1529 reverse
FAM19038-p1-1.1_000914 aquaporin family protein 1052306 1053058 752 reverse
FAM19038-p1-1.1_000915 helix-turn-helix domain-containing protein 1053242 1054192 950 forward
FAM19038-p1-1.1_000916 PDZ domain-containing protein 1054208 1055329 1121 reverse
FAM19038-p1-1.1_000917 helix-turn-helix transcriptional regulator 1056170 1056535 365 reverse
FAM19038-p1-1.1_000918 NAD(P)H-binding protein 1056712 1057314 602 forward
FAM19038-p1-1.1_000919 pseudouridylate synthase 1057298 1058140 842 reverse
FAM19038-p1-1.1_000920 thioredoxin 1058398 1058724 326 forward
FAM19038-p1-1.1_000921 hypothetical protein 1058732 1059433 701 forward
FAM19038-p1-1.1_000922 OsmC family peroxiredoxin 1059593 1060030 437 forward
FAM19038-p1-1.1_000923 hypothetical protein 1060253 1060693 440 forward
FAM19038-p1-1.1_000924 SHOCT domain-containing protein 1060690 1060992 302 forward
FAM19038-p1-1.1_000925 glutaminase A GC:glsA 1061018 1062034 1016 forward
FAM19038-p1-1.1_000926 hypothetical protein 1062065 1062526 461 reverse
FAM19038-p1-1.1_000927 hypothetical protein 1062656 1064962 2306 reverse
FAM19038-p1-1.1_000928 response regulator transcription factor 1065028 1065750 722 reverse
FAM19038-p1-1.1_000929 hypothetical protein 1065917 1066597 680 reverse
FAM19038-p1-1.1_000930 hypothetical protein 1067184 1069520 2336 reverse
FAM19038-p1-1.1_000931 alcohol dehydrogenase catalytic domain-containing protein 1069918 1071027 1109 reverse
FAM19038-p1-1.1_000932 myo-inosose-2 dehydratase GC:iolE 1071420 1072307 887 forward
FAM19038-p1-1.1_000933 GntR family transcriptional regulator 1072537 1073316 779 forward
FAM19038-p1-1.1_000934 hypothetical protein 1073468 1074274 806 reverse
FAM19038-p1-1.1_000935 PLP-dependent aminotransferase family protein 1074727 1076058 1331 forward
FAM19038-p1-1.1_000936 D-alanine--D-alanine ligase 1076213 1077157 944 forward
FAM19038-p1-1.1_000937 SURF1 family protein 1077150 1077947 797 forward
FAM19038-p1-1.1_000938 DUF3817 domain-containing protein 1078681 1079325 644 forward
FAM19038-p1-1.1_000939 ParB/RepB/Spo0J family partition protein 1080207 1081355 1148 reverse
FAM19038-p1-1.1_000940 ParA family protein 1081359 1082360 1001 reverse
FAM19038-p1-1.1_000941 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG GC:rsmG 1083809 1084435 626 reverse
FAM19038-p1-1.1_000942 protein jag 1085582 1086220 638 reverse
FAM19038-p1-1.1_000943 membrane protein insertase YidC GC:yidC 1086488 1087573 1085 reverse
FAM19038-p1-1.1_000944 membrane protein insertion efficiency factor YidD GC:pseudo-gene GC:yidD 1087928 1088143 215 reverse
FAM19038-p1-1.1_000945 ribonuclease P protein component GC:rnpA 1088185 1088676 491 reverse
FAM19038-p1-1.1_000946 50S ribosomal protein L34 GC:rpmH 1088685 1088819 134 reverse
FAM19038-p1-1.1_000947 chromosomal replication initiator protein DnaA GC:dnaA 1089426 1090871 1445 forward
FAM19038-p1-1.1_000948 ABC transporter ATP-binding protein 1091431 1092270 839 forward
FAM19038-p1-1.1_000949 ABC transporter permease 1092299 1094896 2597 forward
FAM19038-p1-1.1_000950 DNA polymerase III subunit beta GC:dnaN 1095073 1096233 1160 forward
FAM19038-p1-1.1_000951 hypothetical protein 1096623 1097318 695 forward
FAM19038-p1-1.1_000952 DNA replication/repair protein RecF GC:recF 1097455 1098780 1325 forward
FAM19038-p1-1.1_000953 DUF721 domain-containing protein 1098773 1099471 698 forward
FAM19038-p1-1.1_000954 mannose-6-phosphate isomerase- class I GC:manA 1099578 1100789 1211 forward
FAM19038-p1-1.1_000955 glycoside hydrolase family 2 protein 1100883 1103303 2420 reverse
FAM19038-p1-1.1_000956 ATPase 1103464 1104471 1007 forward
FAM19038-p1-1.1_000957 DNA topoisomerase (ATP-hydrolyzing) subunit B GC:gyrB 1104772 1106847 2075 forward
FAM19038-p1-1.1_000958 DNA gyrase subunit A GC:gyrA 1106963 1109602 2639 forward
FAM19038-p1-1.1_000959 DUF3566 domain-containing protein 1109514 1110242 728 forward
FAM19038-p1-1.1_000960 transcription antiterminator 1110330 1112222 1892 reverse
FAM19038-p1-1.1_000961 hypothetical protein 1112399 1112764 365 forward
FAM19038-p1-1.1_000962 PTS transporter subunit EIIC 1112764 1114389 1625 forward
FAM19038-p1-1.1_000963 PTS sugar transporter subunit IIA 1114382 1114822 440 forward
FAM19038-p1-1.1_000964 mannitol-1-phosphate 5-dehydrogenase 1114819 1115970 1151 forward
FAM19038-p1-1.1_000965 Gfo/Idh/MocA family oxidoreductase 1116119 1117105 986 forward
FAM19038-p1-1.1_000966 lactate dehydrogenase 1117127 1118098 971 reverse
FAM19038-p1-1.1_000967 tRNA-Ile 1118289 1118362 73 forward
FAM19038-p1-1.1_000968 hypothetical protein 1118475 1118729 254 forward
FAM19038-p1-1.1_000969 MFS transporter 1118787 1120004 1217 reverse
FAM19038-p1-1.1_000970 L-lactate dehydrogenase 1120401 1121363 962 forward
FAM19038-p1-1.1_000971 CbtB-domain containing protein 1121680 1121898 218 forward
FAM19038-p1-1.1_000972 CbtA family protein 1122085 1123698 1613 forward
FAM19038-p1-1.1_000973 L-lactate dehydrogenase 1123828 1124790 962 reverse
FAM19038-p1-1.1_000974 helix-turn-helix transcriptional regulator 1125447 1125767 320 reverse
FAM19038-p1-1.1_000975 nuclear transport factor 2 family protein 1125821 1126216 395 forward
FAM19038-p1-1.1_000976 ClC family H(+)/Cl(-) exchange transporter 1126635 1128200 1565 forward
FAM19038-p1-1.1_000977 multidrug effflux MFS transporter 1128467 1129714 1247 reverse
FAM19038-p1-1.1_000978 MarR family transcriptional regulator 1129714 1130244 530 forward
FAM19038-p1-1.1_000979 IS3 family transposase 1130493 1130972 479 reverse
FAM19038-p1-1.1_000980 IS3 family transposase 1130974 1131321 347 reverse
FAM19038-p1-1.1_000981 transposase 1131375 1131662 287 reverse
FAM19038-p1-1.1_000982 hypothetical protein 1131916 1132344 428 forward
FAM19038-p1-1.1_000983 ATP-binding cassette domain-containing protein 1132359 1133438 1079 forward
FAM19038-p1-1.1_000984 ABC transporter permease 1133435 1134163 728 forward
FAM19038-p1-1.1_000985 ABC transporter permease 1134160 1134978 818 forward
FAM19038-p1-1.1_000986 class I SAM-dependent methyltransferase 1134975 1135694 719 forward
FAM19038-p1-1.1_000987 carboxylesterase/lipase family protein 1135678 1137042 1364 reverse
FAM19038-p1-1.1_000988 pyridoxal phosphate-dependent aminotransferase 1137116 1138300 1184 reverse
FAM19038-p1-1.1_000989 tautomerase family protein 1138429 1138839 410 reverse
FAM19038-p1-1.1_000990 xylulose kinase 1139314 1140888 1574 forward
FAM19038-p1-1.1_000991 glycerol-3-phosphate dehydrogenase 1140972 1142015 1043 forward
FAM19038-p1-1.1_000992 PTS sugar transporter subunit IIA 1142449 1142886 437 forward
FAM19038-p1-1.1_000993 PTS sugar transporter subunit IIB GC:pseudo-gene 1142886 1143379 493 forward
FAM19038-p1-1.1_000994 PTS mannose/fructose/sorbose transporter subunit IIC 1143395 1144210 815 forward
FAM19038-p1-1.1_000995 PTS mannose transporter subunit IID GC:manZ 1144222 1145079 857 forward
FAM19038-p1-1.1_000996 HAD family phosphatase 1145376 1146149 773 forward
FAM19038-p1-1.1_000997 hypothetical protein 1146146 1146592 446 forward
FAM19038-p1-1.1_000998 LacI family transcriptional regulator 1146596 1147624 1028 forward
FAM19038-p1-1.1_000999 hypothetical protein 1147657 1148382 725 reverse
FAM19038-p1-1.1_001000 ATP-binding cassette domain-containing protein 1148379 1149305 926 reverse