contig: FAM19038-p1-1.1_scf1 genome: FAM19038-p1-1.1
species: Acidipropionibacterium thoenii DSM 20276 taxid: 1122998

Metadata

Contig type Scaffold
Is Circular Yes
Is Plasmid No
GC-content 68.7 %
Length 2999408 bp
Gene count 2686

Genes on this contig

Gene ID Product Gene code Start ↑ End Length Strand
FAM19038-p1-1.1_000201 methylmalonyl-CoA mutase small subunit GC:mutA 217808 219715 1907 reverse
FAM19038-p1-1.1_000202 alpha/beta hydrolase 220176 221102 926 reverse
FAM19038-p1-1.1_000203 nucleotide sugar dehydrogenase 221199 222374 1175 forward
FAM19038-p1-1.1_000204 thiol peroxidase GC:tpx 222531 223034 503 reverse
FAM19038-p1-1.1_000205 aldo/keto reductase 223188 224159 971 reverse
FAM19038-p1-1.1_000206 PQQ-dependent sugar dehydrogenase 224228 225433 1205 reverse
FAM19038-p1-1.1_000207 hypothetical protein 225519 226325 806 forward
FAM19038-p1-1.1_000208 ACT domain-containing protein 226403 226921 518 reverse
FAM19038-p1-1.1_000209 peptidyl-tRNA hydrolase 226949 227581 632 reverse
FAM19038-p1-1.1_000210 HAD-IA family hydrolase 227679 228311 632 forward
FAM19038-p1-1.1_000211 hypothetical protein 228432 228842 410 reverse
FAM19038-p1-1.1_000212 CHAD domain-containing protein 229037 229891 854 reverse
FAM19038-p1-1.1_000213 MFS transporter 229904 231421 1517 reverse
FAM19038-p1-1.1_000214 response regulator transcription factor GC:pseudo-gene 231499 232131 632 reverse
FAM19038-p1-1.1_000215 hypothetical protein 232406 232585 179 forward
FAM19038-p1-1.1_000216 hypothetical protein 232630 233862 1232 forward
FAM19038-p1-1.1_000217 isochorismatase family protein 234148 234714 566 forward
FAM19038-p1-1.1_000218 methylated-DNA--[protein]-cysteine S-methyltransferase 234810 235337 527 reverse
FAM19038-p1-1.1_000219 DUF1801 domain-containing protein 235334 235711 377 reverse
FAM19038-p1-1.1_000220 histone deacetylase 235798 236397 599 reverse
FAM19038-p1-1.1_000221 ABC transporter ATP-binding protein 236414 238309 1895 reverse
FAM19038-p1-1.1_000222 hypothetical protein 238338 238703 365 reverse
FAM19038-p1-1.1_000223 GNAT family N-acetyltransferase 238970 239509 539 reverse
FAM19038-p1-1.1_000224 Txe/YoeB family addiction module toxin 239759 240013 254 reverse
FAM19038-p1-1.1_000225 type II toxin-antitoxin system prevent-host-death family antitoxin 240014 240274 260 reverse
FAM19038-p1-1.1_000226 HigA family addiction module antidote protein 240564 240884 320 reverse
FAM19038-p1-1.1_000227 redox-regulated ATPase YchF GC:ychF 240977 242050 1073 reverse
FAM19038-p1-1.1_000228 VOC family protein 242112 243014 902 forward
FAM19038-p1-1.1_000229 M18 family aminopeptidase 243015 244334 1319 reverse
FAM19038-p1-1.1_000230 DNA recombination protein RmuC 244445 245812 1367 forward
FAM19038-p1-1.1_000231 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 245835 246875 1040 reverse
FAM19038-p1-1.1_000232 exodeoxyribonuclease VII large subunit 246874 248118 1244 forward
FAM19038-p1-1.1_000233 exodeoxyribonuclease VII small subunit 248115 248399 284 forward
FAM19038-p1-1.1_000234 DUF4245 domain-containing protein 248410 248976 566 reverse
FAM19038-p1-1.1_000235 PhoH family protein 249011 250375 1364 reverse
FAM19038-p1-1.1_000236 hemolysin III family protein 250539 251273 734 reverse
FAM19038-p1-1.1_000237 isoprenyl transferase 251420 252241 821 forward
FAM19038-p1-1.1_000238 thioredoxin domain-containing protein 252290 254314 2024 reverse
FAM19038-p1-1.1_000239 GNAT family acetyltransferase 254363 254539 176 reverse
FAM19038-p1-1.1_000240 DUF4307 domain-containing protein 254538 255011 473 forward
FAM19038-p1-1.1_000241 transcription elongation factor GreA GC:greA 255104 255601 497 forward
FAM19038-p1-1.1_000242 hypothetical protein 255765 256814 1049 reverse
FAM19038-p1-1.1_000243 AI-2E family transporter 256900 258162 1262 reverse
FAM19038-p1-1.1_000244 uracil-DNA glycosylase 258276 258980 704 forward
FAM19038-p1-1.1_000245 peptide-methionine (S)-S-oxide reductase MsrA GC:msrA 259122 259766 644 forward
FAM19038-p1-1.1_000246 hypothetical protein 259801 260190 389 reverse
FAM19038-p1-1.1_000247 hypothetical protein 260187 260714 527 reverse
FAM19038-p1-1.1_000248 GNAT family N-acetyltransferase 260771 261247 476 forward
FAM19038-p1-1.1_000249 5S ribosomal RNA GC:rrf 261547 261663 116 reverse
FAM19038-p1-1.1_000250 23S ribosomal RNA 261829 264930 3101 reverse
FAM19038-p1-1.1_000251 16S ribosomal RNA 265247 266785 1538 reverse
FAM19038-p1-1.1_000252 tyrosine--tRNA ligase 267591 268850 1259 reverse
FAM19038-p1-1.1_000253 ArgR family transcriptional regulator 268973 269506 533 reverse
FAM19038-p1-1.1_000254 TetR family transcriptional regulator 269571 270236 665 reverse
FAM19038-p1-1.1_000255 biotin synthase BioB GC:bioB 270369 271439 1070 forward
FAM19038-p1-1.1_000256 phenylalanine--tRNA ligase subunit beta 271508 274027 2519 reverse
FAM19038-p1-1.1_000257 phenylalanine--tRNA ligase subunit alpha GC:pheS 274024 275133 1109 reverse
FAM19038-p1-1.1_000258 DUF2339 domain-containing protein 275268 277160 1892 reverse
FAM19038-p1-1.1_000259 RNA methyltransferase 277590 278396 806 reverse
FAM19038-p1-1.1_000260 50S ribosomal protein L20 GC:rplT 278410 278781 371 reverse
FAM19038-p1-1.1_000261 50S ribosomal protein L35 GC:rpmI 278921 279127 206 reverse
FAM19038-p1-1.1_000262 translation initiation factor IF-3 279277 279990 713 reverse
FAM19038-p1-1.1_000263 5S ribosomal RNA GC:rrf 280374 280490 116 reverse
FAM19038-p1-1.1_000264 23S ribosomal RNA 280656 283757 3101 reverse
FAM19038-p1-1.1_000265 16S ribosomal RNA 284074 285612 1538 reverse
FAM19038-p1-1.1_000266 hypothetical protein 286324 287301 977 forward
FAM19038-p1-1.1_000267 NUDIX domain-containing protein 287344 288039 695 forward
FAM19038-p1-1.1_000268 Bax inhibitor-1/YccA family protein 288135 288971 836 reverse
FAM19038-p1-1.1_000269 tRNA-Gly 289145 289217 72 forward
FAM19038-p1-1.1_000270 tRNA-Val 289219 289293 74 forward
FAM19038-p1-1.1_000271 tRNA-Asp 289319 289392 73 forward
FAM19038-p1-1.1_000272 tRNA-Leu 289506 289578 72 reverse
FAM19038-p1-1.1_000273 Ppx/GppA family phosphatase 289582 290523 941 reverse
FAM19038-p1-1.1_000274 DUF501 domain-containing protein 290520 291173 653 reverse
FAM19038-p1-1.1_000275 septum formation initiator family protein 291259 291897 638 reverse
FAM19038-p1-1.1_000276 phosphopyruvate hydratase GC:eno 292019 293299 1280 reverse
FAM19038-p1-1.1_000277 MazG family protein 293421 294131 710 reverse
FAM19038-p1-1.1_000278 hypothetical protein 294128 294691 563 reverse
FAM19038-p1-1.1_000279 transcription-repair coupling factor GC:mfd 294762 298496 3734 reverse
FAM19038-p1-1.1_000280 aminoacyl-tRNA hydrolase 298568 299170 602 reverse
FAM19038-p1-1.1_000281 50S ribosomal protein L25/general stress protein Ctc 299167 299802 635 reverse
FAM19038-p1-1.1_000282 ribose-phosphate diphosphokinase 300011 300979 968 reverse
FAM19038-p1-1.1_000283 bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU GC:glmU 300976 302442 1466 reverse
FAM19038-p1-1.1_000284 hypothetical protein 302711 302881 170 forward
FAM19038-p1-1.1_000285 tRNA-Gln 302974 303052 78 reverse
FAM19038-p1-1.1_000286 TetR/AcrR family transcriptional regulator 303257 303916 659 forward
FAM19038-p1-1.1_000287 MarR family transcriptional regulator 303807 304400 593 reverse
FAM19038-p1-1.1_000288 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 304404 305354 950 reverse
FAM19038-p1-1.1_000289 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA GC:rsmA 305415 306290 875 reverse
FAM19038-p1-1.1_000290 TatD family hydrolase 306283 307137 854 reverse
FAM19038-p1-1.1_000291 16S rRNA (cytidine(1402)-2'-O)-methyltransferase GC:rsmI 307170 308069 899 reverse
FAM19038-p1-1.1_000292 phospholipid carrier-dependent glycosyltransferase 308261 309790 1529 forward
FAM19038-p1-1.1_000293 nitrate reductase 309901 311379 1478 forward
FAM19038-p1-1.1_000294 protein kinase 311396 312727 1331 reverse
FAM19038-p1-1.1_000295 5-oxoprolinase/urea amidolyase family protein 312720 314372 1652 reverse
FAM19038-p1-1.1_000296 LamB/YcsF family protein 314369 315121 752 reverse
FAM19038-p1-1.1_000297 ABC-ATPase domain-containing protein 315267 317045 1778 forward
FAM19038-p1-1.1_000298 hypothetical protein 317245 317907 662 reverse
FAM19038-p1-1.1_000299 alcohol acetyltransferase GC:pseudo-gene 318027 319472 1445 reverse
FAM19038-p1-1.1_000300 alpha/beta hydrolase 319469 320542 1073 reverse