contig: FAM19038-p1-1.1_scf1 genome: FAM19038-p1-1.1
species: Acidipropionibacterium thoenii DSM 20276 taxid: 1122998

Metadata

Contig type Scaffold
Is Circular Yes
Is Plasmid No
GC-content 68.7 %
Length 2999408 bp
Gene count 2686

Genes on this contig

Gene ID Product Gene code Start ↑ End Length Strand
FAM19038-p1-1.1_000101 RDD family protein 106532 106972 440 reverse
FAM19038-p1-1.1_000102 hypothetical protein 107057 108511 1454 reverse
FAM19038-p1-1.1_000103 type I glutamate--ammonia ligase GC:glnA 108675 110096 1421 forward
FAM19038-p1-1.1_000104 site-specific integrase 110106 111251 1145 reverse
FAM19038-p1-1.1_000105 helix-turn-helix transcriptional regulator 111238 111741 503 reverse
FAM19038-p1-1.1_000106 helix-turn-helix domain-containing protein 111900 112109 209 forward
FAM19038-p1-1.1_000107 hypothetical protein 112106 112441 335 forward
FAM19038-p1-1.1_000108 hypothetical protein 112429 112938 509 forward
FAM19038-p1-1.1_000109 hypothetical protein 112935 113510 575 forward
FAM19038-p1-1.1_000110 hypothetical protein 113536 113925 389 forward
FAM19038-p1-1.1_000111 ATP-binding protein 113922 115436 1514 forward
FAM19038-p1-1.1_000112 hypothetical protein 116081 116293 212 forward
FAM19038-p1-1.1_000113 hypothetical protein 116306 116752 446 forward
FAM19038-p1-1.1_000114 phage major capsid protein 116989 117810 821 forward
FAM19038-p1-1.1_000115 Nif3-like dinuclear metal center hexameric protein 118678 119502 824 forward
FAM19038-p1-1.1_000116 threonine/serine exporter family protein 119511 120836 1325 forward
FAM19038-p1-1.1_000117 bifunctional [glutamine synthetase] adenylyltransferase/[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase 120818 123793 2975 reverse
FAM19038-p1-1.1_000118 hypothetical protein 123875 124633 758 forward
FAM19038-p1-1.1_000119 type I glutamate--ammonia ligase GC:glnA 124703 126004 1301 reverse
FAM19038-p1-1.1_000120 DUF2510 domain-containing protein 126141 127040 899 forward
FAM19038-p1-1.1_000121 ABC transporter permease 127361 128629 1268 reverse
FAM19038-p1-1.1_000122 ABC transporter ATP-binding protein 128616 129311 695 reverse
FAM19038-p1-1.1_000123 hypothetical protein 129308 130729 1421 reverse
FAM19038-p1-1.1_000124 hypothetical protein 130809 131693 884 reverse
FAM19038-p1-1.1_000125 hypothetical protein 131747 132151 404 reverse
FAM19038-p1-1.1_000126 DUF2510 domain-containing protein GC:pseudo-gene 132533 132832 299 forward
FAM19038-p1-1.1_000127 hypothetical protein 132883 133416 533 reverse
FAM19038-p1-1.1_000128 hypothetical protein 133473 134729 1256 reverse
FAM19038-p1-1.1_000129 ATP-binding cassette domain-containing protein 134726 135490 764 reverse
FAM19038-p1-1.1_000130 hypothetical protein 136597 137424 827 forward
FAM19038-p1-1.1_000131 IS256 family transposase 137526 138785 1259 forward
FAM19038-p1-1.1_000132 response regulator transcription factor 139152 139817 665 forward
FAM19038-p1-1.1_000133 type I methionyl aminopeptidase GC:map 139996 140850 854 forward
FAM19038-p1-1.1_000134 ABC transporter ATP-binding protein 140978 142696 1718 reverse
FAM19038-p1-1.1_000135 ABC transporter substrate-binding protein GC:pseudo-gene 142696 144365 1669 reverse
FAM19038-p1-1.1_000136 ABC transporter permease GC:pseudo-gene 144412 145397 985 reverse
FAM19038-p1-1.1_000137 ABC transporter permease GC:pseudo-gene 145394 146285 891 reverse
FAM19038-p1-1.1_000138 rhomboid family intramembrane serine protease 146639 147343 704 reverse
FAM19038-p1-1.1_000139 magnesium and cobalt transport protein CorA 147510 148604 1094 forward
FAM19038-p1-1.1_000140 hypothetical protein 148536 149828 1292 reverse
FAM19038-p1-1.1_000141 RNase P RNA component class A GC:rnpB 150265 150645 380 reverse
FAM19038-p1-1.1_000142 nucleic acid-binding protein 150660 151400 740 reverse
FAM19038-p1-1.1_000143 APC family permease 151771 153153 1382 forward
FAM19038-p1-1.1_000144 carbon-nitrogen hydrolase family protein 153273 154022 749 forward
FAM19038-p1-1.1_000145 4-aminobutyrate--2-oxoglutarate transaminase GC:gabT 154084 155415 1331 reverse
FAM19038-p1-1.1_000146 aminopeptidase P family protein 155644 157179 1535 forward
FAM19038-p1-1.1_000147 cytochrome C oxidase subunit I 157312 158142 830 reverse
FAM19038-p1-1.1_000148 hypothetical protein 158372 158878 506 reverse
FAM19038-p1-1.1_000149 CBS domain-containing protein 159077 160351 1274 forward
FAM19038-p1-1.1_000150 DUF1003 domain-containing protein 160386 160934 548 forward
FAM19038-p1-1.1_000151 Mrp/NBP35 family ATP-binding protein 161063 162223 1160 forward
FAM19038-p1-1.1_000152 Sec-independent protein translocase subunit TatB 162368 162793 425 reverse
FAM19038-p1-1.1_000153 4-hydroxy-tetrahydrodipicolinate synthase GC:dapA 162856 163737 881 reverse
FAM19038-p1-1.1_000154 methyltransferase 163785 164489 704 forward
FAM19038-p1-1.1_000155 vitamin K epoxide reductase family protein 164561 165160 599 forward
FAM19038-p1-1.1_000156 glucose-1-phosphate adenylyltransferase GC:glgC 165314 166540 1226 reverse
FAM19038-p1-1.1_000157 glycogen synthase GC:glgA 166659 167846 1187 forward
FAM19038-p1-1.1_000158 DUF3117 domain-containing protein 167946 168113 167 reverse
FAM19038-p1-1.1_000159 DivIVA domain-containing protein 168154 168516 362 reverse
FAM19038-p1-1.1_000160 TIGR00730 family Rossman fold protein 168516 169292 776 reverse
FAM19038-p1-1.1_000161 succinyl-diaminopimelate desuccinylase 169403 170494 1091 reverse
FAM19038-p1-1.1_000162 2-3-4-5-tetrahydropyridine-2-6-dicarboxylate N-succinyltransferase GC:dapD GC:pseudo-gene 170548 171491 943 forward
FAM19038-p1-1.1_000163 hypothetical protein 171570 172412 842 forward
FAM19038-p1-1.1_000164 serine hydrolase 172465 173331 866 forward
FAM19038-p1-1.1_000165 succinyldiaminopimelate transaminase GC:dapC 173397 174524 1127 reverse
FAM19038-p1-1.1_000166 ferredoxin family protein 174521 174841 320 reverse
FAM19038-p1-1.1_000167 hypothetical protein 174985 176718 1733 reverse
FAM19038-p1-1.1_000168 serine hydrolase 176836 178095 1259 reverse
FAM19038-p1-1.1_000169 NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta 178104 179537 1433 reverse
FAM19038-p1-1.1_000170 Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha 179541 181082 1541 reverse
FAM19038-p1-1.1_000171 MFS transporter 181219 182523 1304 reverse
FAM19038-p1-1.1_000172 MarR family transcriptional regulator 182520 182963 443 reverse
FAM19038-p1-1.1_000173 hypothetical protein 183024 184049 1025 reverse
FAM19038-p1-1.1_000174 transketolase 184213 186291 2078 reverse
FAM19038-p1-1.1_000175 L-ribulose-5-phosphate 4-epimerase 186340 187104 764 reverse
FAM19038-p1-1.1_000176 ribulokinase 187097 188827 1730 reverse
FAM19038-p1-1.1_000177 sn-glycerol-1-phosphate dehydrogenase 188900 190261 1361 reverse
FAM19038-p1-1.1_000178 xylulose kinase 190425 191987 1562 reverse
FAM19038-p1-1.1_000179 HAD-IIA family hydrolase 192083 192937 854 reverse
FAM19038-p1-1.1_000180 hypothetical protein 192976 194055 1079 reverse
FAM19038-p1-1.1_000181 ribose-5-phosphate isomerase 194273 194764 491 reverse
FAM19038-p1-1.1_000182 DeoR/GlpR transcriptional regulator 194907 195737 830 reverse
FAM19038-p1-1.1_000183 phosphoribosyltransferase 195819 196322 503 forward
FAM19038-p1-1.1_000184 dihydroxyacetone kinase family protein 196330 198030 1700 reverse
FAM19038-p1-1.1_000185 alcohol dehydrogenase catalytic domain-containing protein 198223 199290 1067 forward
FAM19038-p1-1.1_000186 bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase 199294 202836 3542 reverse
FAM19038-p1-1.1_000187 allantoin permease 203053 204546 1493 forward
FAM19038-p1-1.1_000188 cysteine hydrolase 204546 205097 551 forward
FAM19038-p1-1.1_000189 zinc ABC transporter solute-binding protein 205238 206188 950 forward
FAM19038-p1-1.1_000190 ABC transporter ATP-binding protein 206288 207157 869 forward
FAM19038-p1-1.1_000191 metal ABC transporter permease 207159 208004 845 forward
FAM19038-p1-1.1_000192 helix-turn-helix transcriptional regulator 208127 208489 362 forward
FAM19038-p1-1.1_000193 hypothetical protein 208491 209996 1505 forward
FAM19038-p1-1.1_000194 ABC transporter substrate-binding protein 210170 211108 938 forward
FAM19038-p1-1.1_000195 ABC transporter substrate-binding protein 211152 212093 941 forward
FAM19038-p1-1.1_000196 amino acid ABC transporter permease 212099 213040 941 forward
FAM19038-p1-1.1_000197 amino acid ABC transporter ATP-binding protein 213097 213858 761 forward
FAM19038-p1-1.1_000198 RNA-binding S4 domain-containing protein 214022 214237 215 forward
FAM19038-p1-1.1_000199 methylmalonyl Co-A mutase-associated GTPase MeaB GC:meaB 214320 215348 1028 reverse
FAM19038-p1-1.1_000200 methylmalonyl-CoA mutase GC:scpA 215619 217811 2192 reverse