contig: FAM19038-p1-1.1_scf1 genome: FAM19038-p1-1.1
species: Acidipropionibacterium thoenii DSM 20276 taxid: 1122998

Metadata

Contig type Scaffold
Is Circular Yes
Is Plasmid No
GC-content 68.7 %
Length 2999408 bp
Gene count 2686

Genes on this contig

Gene ID Product Gene code Start ↑ End Length Strand
FAM19038-p1-1.1_000301 TetR family transcriptional regulator 320591 321178 587 reverse
FAM19038-p1-1.1_000302 MFS transporter 321175 323205 2030 reverse
FAM19038-p1-1.1_000303 type I glyceraldehyde-3-phosphate dehydrogenase GC:gap 323648 324652 1004 reverse
FAM19038-p1-1.1_000304 TetR/AcrR family transcriptional regulator 324654 325301 647 reverse
FAM19038-p1-1.1_000305 MerR family transcriptional regulator 325367 326389 1022 reverse
FAM19038-p1-1.1_000306 HEAT repeat domain-containing protein 326403 327056 653 reverse
FAM19038-p1-1.1_000307 DUF1684 domain-containing protein 327293 328117 824 forward
FAM19038-p1-1.1_000308 hypothetical protein 328235 328672 437 reverse
FAM19038-p1-1.1_000309 ATPase 328813 329793 980 reverse
FAM19038-p1-1.1_000310 winged helix-turn-helix transcriptional regulator 329851 330195 344 reverse
FAM19038-p1-1.1_000311 Gfo/Idh/MocA family oxidoreductase 330257 331288 1031 reverse
FAM19038-p1-1.1_000312 cardiolipin synthase GC:cls 331523 333028 1505 forward
FAM19038-p1-1.1_000313 MFS transporter 333075 334322 1247 reverse
FAM19038-p1-1.1_000314 winged helix-turn-helix transcriptional regulator 334354 334719 365 reverse
FAM19038-p1-1.1_000315 DMT family transporter GC:pseudo-gene 334931 335775 844 forward
FAM19038-p1-1.1_000316 hypothetical protein 335873 336739 866 forward
FAM19038-p1-1.1_000317 AI-2E family transporter 336813 337913 1100 reverse
FAM19038-p1-1.1_000318 tRNA-Ala 338178 338253 75 reverse
FAM19038-p1-1.1_000319 hypothetical protein GC:pseudo-gene 338372 338845 473 reverse
FAM19038-p1-1.1_000320 GNAT family N-acetyltransferase 339266 339898 632 reverse
FAM19038-p1-1.1_000321 molybdopterin biosynthesis protein 339986 341263 1277 reverse
FAM19038-p1-1.1_000322 5-formyltetrahydrofolate cyclo-ligase 341343 342011 668 forward
FAM19038-p1-1.1_000323 zinc ribbon domain-containing protein 342239 342568 329 forward
FAM19038-p1-1.1_000324 hypothetical protein 342628 343296 668 forward
FAM19038-p1-1.1_000325 large conductance mechanosensitive channel protein MscL GC:mscL 343443 343811 368 forward
FAM19038-p1-1.1_000326 hypothetical protein 343860 344240 380 reverse
FAM19038-p1-1.1_000327 UTP--glucose-1-phosphate uridylyltransferase 344237 345637 1400 reverse
FAM19038-p1-1.1_000328 tRNA-Arg 345748 345823 75 forward
FAM19038-p1-1.1_000329 inositol 2-dehydrogenase GC:iolG 345851 346864 1013 reverse
FAM19038-p1-1.1_000330 sugar porter family MFS transporter 347053 348660 1607 reverse
FAM19038-p1-1.1_000331 hypothetical protein 348728 348916 188 reverse
FAM19038-p1-1.1_000332 LacI family transcriptional regulator 349090 350121 1031 reverse
FAM19038-p1-1.1_000333 hypothetical protein 350361 350621 260 forward
FAM19038-p1-1.1_000334 3D-(3-5/4)-trihydroxycyclohexane-1-2-dione acylhydrolase (decyclizing) GC:iolD 350889 352793 1904 reverse
FAM19038-p1-1.1_000335 5-deoxy-glucuronate isomerase GC:iolB 352816 353712 896 reverse
FAM19038-p1-1.1_000336 deoxyribose-phosphate aldolase 353718 354599 881 reverse
FAM19038-p1-1.1_000337 5-dehydro-2-deoxygluconokinase GC:iolC 354596 355582 986 reverse
FAM19038-p1-1.1_000338 transaldolase 355828 356904 1076 forward
FAM19038-p1-1.1_000339 thioredoxin GC:trxA 357041 357421 380 reverse
FAM19038-p1-1.1_000340 class I SAM-dependent methyltransferase 357558 358409 851 reverse
FAM19038-p1-1.1_000341 metal-dependent transcriptional regulator 358422 359138 716 reverse
FAM19038-p1-1.1_000342 N-acetylglucosamine-6-phosphate deacetylase 359321 360454 1133 reverse
FAM19038-p1-1.1_000343 phosphoserine transaminase 360564 361694 1130 forward
FAM19038-p1-1.1_000344 hypothetical protein 361718 362662 944 reverse
FAM19038-p1-1.1_000345 hypothetical protein 362858 363541 683 forward
FAM19038-p1-1.1_000346 NCS2 family permease 363606 365012 1406 reverse
FAM19038-p1-1.1_000347 VWA domain-containing protein 365596 367239 1643 reverse
FAM19038-p1-1.1_000348 DUF3027 domain-containing protein 367558 368298 740 reverse
FAM19038-p1-1.1_000349 cold-shock protein 368607 368990 383 reverse
FAM19038-p1-1.1_000350 ABC transporter permease 369461 370183 722 forward
FAM19038-p1-1.1_000351 glucosamine-6-phosphate deaminase GC:nagB 370276 371061 785 reverse
FAM19038-p1-1.1_000352 hypothetical protein 371374 372258 884 forward
FAM19038-p1-1.1_000353 helicase-associated domain-containing protein 372255 374462 2207 forward
FAM19038-p1-1.1_000354 DEAD/DEAH box helicase 374494 376149 1655 forward
FAM19038-p1-1.1_000355 hypothetical protein 376153 376833 680 reverse
FAM19038-p1-1.1_000356 hypothetical protein 376850 377305 455 reverse
FAM19038-p1-1.1_000357 LacI family transcriptional regulator 377608 378621 1013 reverse
FAM19038-p1-1.1_000358 TIM barrel protein 378756 379688 932 reverse
FAM19038-p1-1.1_000359 CPBP family intramembrane metalloprotease 379783 380667 884 reverse
FAM19038-p1-1.1_000360 hypothetical protein 380761 381621 860 reverse
FAM19038-p1-1.1_000361 cobalamin biosynthesis protein 381668 383035 1367 reverse
FAM19038-p1-1.1_000362 precorrin-3B C(17)-methyltransferase GC:cobJ 383038 385608 2570 reverse
FAM19038-p1-1.1_000363 precorrin-4 C(11)-methyltransferase GC:cobM GC:pseudo-gene 385791 386753 962 reverse
FAM19038-p1-1.1_000364 precorrin-2 C(20)-methyltransferase GC:cobI 386750 387511 761 reverse
FAM19038-p1-1.1_000365 cobyric acid synthase 387781 389235 1454 reverse
FAM19038-p1-1.1_000366 cobalamin biosynthesis protein CobD GC:cobD 389232 390335 1103 reverse
FAM19038-p1-1.1_000367 histidine phosphatase family protein 390627 391205 578 forward
FAM19038-p1-1.1_000368 dihydropteroate synthase GC:folP 391168 392109 941 forward
FAM19038-p1-1.1_000369 O-acetyl-ADP-ribose deacetylase 392227 392745 518 forward
FAM19038-p1-1.1_000370 DedA family protein 392811 393656 845 reverse
FAM19038-p1-1.1_000371 DUF488 family protein 393749 394135 386 reverse
FAM19038-p1-1.1_000372 glycine C-acetyltransferase 394132 395361 1229 reverse
FAM19038-p1-1.1_000373 L-threonine 3-dehydrogenase GC:tdh 395427 396464 1037 reverse
FAM19038-p1-1.1_000374 carbohydrate ABC transporter permease 396617 397456 839 reverse
FAM19038-p1-1.1_000375 sugar ABC transporter permease 397557 398516 959 reverse
FAM19038-p1-1.1_000376 sugar ABC transporter substrate-binding protein 398516 399808 1292 reverse
FAM19038-p1-1.1_000377 ROK family protein 399833 402148 2315 reverse
FAM19038-p1-1.1_000378 L-serine ammonia-lyase 402597 404051 1454 forward
FAM19038-p1-1.1_000379 IS481-like element ISPfr15 family transposase 404150 405154 1004 forward
FAM19038-p1-1.1_000380 MFS transporter 405310 406845 1535 forward
FAM19038-p1-1.1_000381 sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC GC:ugpC 407029 408141 1112 forward
FAM19038-p1-1.1_000382 hypothetical protein 408342 409241 899 reverse
FAM19038-p1-1.1_000383 O-succinylhomoserine (thiol)-lyase 409604 410761 1157 forward
FAM19038-p1-1.1_000384 DUF4032 domain-containing protein 411066 412352 1286 forward
FAM19038-p1-1.1_000385 hypothetical protein 412430 412723 293 reverse
FAM19038-p1-1.1_000386 cysteine--tRNA ligase 412762 414237 1475 forward
FAM19038-p1-1.1_000387 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB GC:rlmB 414374 415363 989 forward
FAM19038-p1-1.1_000388 hypothetical protein 415662 415799 137 reverse
FAM19038-p1-1.1_000389 MFS transporter 415848 417077 1229 forward
FAM19038-p1-1.1_000390 glycine hydroxymethyltransferase 417110 418576 1466 forward
FAM19038-p1-1.1_000391 hypothetical protein 419093 419746 653 forward
FAM19038-p1-1.1_000392 type II toxin-antitoxin system MqsR family toxin 420109 420618 509 forward
FAM19038-p1-1.1_000393 M20 family metallopeptidase 420844 422169 1325 reverse
FAM19038-p1-1.1_000394 hypothetical protein 422343 423167 824 forward
FAM19038-p1-1.1_000395 MurR/RpiR family transcriptional regulator 423260 423937 677 forward
FAM19038-p1-1.1_000396 o-succinylbenzoate synthase GC:menC 423934 425055 1121 forward
FAM19038-p1-1.1_000397 hypothetical protein 425129 425764 635 forward
FAM19038-p1-1.1_000398 MATE family efflux transporter 425783 427297 1514 forward
FAM19038-p1-1.1_000399 2-C-methyl-D-erythritol 2-4-cyclodiphosphate synthase 427208 427690 482 reverse
FAM19038-p1-1.1_000400 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GC:ispD 427687 428463 776 reverse