contig: FAM19038-p1-1.1_scf1 genome: FAM19038-p1-1.1
species: Acidipropionibacterium thoenii DSM 20276 taxid: 1122998

Metadata

Contig type Scaffold
Is Circular Yes
Is Plasmid No
GC-content 68.7 %
Length 2999408 bp
Gene count 2686

Genes on this contig

Gene ID Product Gene code Start ↑ End Length Strand
FAM19038-p1-1.1_001901 hypothetical protein 2129845 2130603 758 reverse
FAM19038-p1-1.1_001902 1-deoxy-D-xylulose-5-phosphate reductoisomerase 2130664 2131749 1085 forward
FAM19038-p1-1.1_001903 ABC transporter ATP-binding protein 2131788 2132576 788 forward
FAM19038-p1-1.1_001904 NfeD family protein 2132584 2133078 494 forward
FAM19038-p1-1.1_001905 SPFH/Band 7/PHB domain protein 2133164 2134498 1334 forward
FAM19038-p1-1.1_001906 bile acid:sodium symporter 2134578 2135570 992 reverse
FAM19038-p1-1.1_001907 hypothetical protein 2135970 2137097 1127 forward
FAM19038-p1-1.1_001908 hypothetical protein 2137042 2137455 413 forward
FAM19038-p1-1.1_001909 ABC transporter permease 2137452 2138420 968 forward
FAM19038-p1-1.1_001910 ABC transporter permease 2138417 2139193 776 forward
FAM19038-p1-1.1_001911 ABC transporter ATP-binding protein 2139190 2139987 797 forward
FAM19038-p1-1.1_001912 ABC transporter ATP-binding protein 2139975 2140796 821 forward
FAM19038-p1-1.1_001913 RNA methyltransferase 2140820 2141635 815 forward
FAM19038-p1-1.1_001914 peptide deformylase GC:def 2141682 2142284 602 reverse
FAM19038-p1-1.1_001915 lactonase family protein 2142353 2143420 1067 reverse
FAM19038-p1-1.1_001916 tyrosine recombinase XerC 2143489 2144406 917 forward
FAM19038-p1-1.1_001917 peptidoglycan DD-metalloendopeptidase family protein 2144416 2145483 1067 reverse
FAM19038-p1-1.1_001918 30S ribosomal protein S2 GC:rpsB 2145836 2146795 959 forward
FAM19038-p1-1.1_001919 elongation factor Ts 2146832 2147644 812 forward
FAM19038-p1-1.1_001920 UMP kinase 2147805 2148518 713 forward
FAM19038-p1-1.1_001921 ribosome recycling factor GC:frr 2148566 2149123 557 forward
FAM19038-p1-1.1_001922 phosphatidate cytidylyltransferase 2149143 2150015 872 forward
FAM19038-p1-1.1_001923 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN GC:rlmN 2150092 2151309 1217 forward
FAM19038-p1-1.1_001924 ionic transporter y4hA 2151415 2152536 1121 reverse
FAM19038-p1-1.1_001925 peptidase 2152674 2153957 1283 forward
FAM19038-p1-1.1_001926 flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase GC:ispG 2154056 2155198 1142 forward
FAM19038-p1-1.1_001927 GNAT family N-acetyltransferase 2155200 2156036 836 forward
FAM19038-p1-1.1_001928 circularly permuted type 2 ATP-grasp protein 2156095 2157729 1634 forward
FAM19038-p1-1.1_001929 alpha-E domain-containing protein 2157735 2158634 899 forward
FAM19038-p1-1.1_001930 transglutaminase family protein 2158638 2159480 842 forward
FAM19038-p1-1.1_001931 proline--tRNA ligase 2159623 2161368 1745 forward
FAM19038-p1-1.1_001932 TSUP family transporter 2161373 2162155 782 forward
FAM19038-p1-1.1_001933 DUF4439 domain-containing protein 2162164 2163108 944 reverse
FAM19038-p1-1.1_001934 ribosome maturation factor RimP GC:rimP 2163179 2163706 527 forward
FAM19038-p1-1.1_001935 transcription termination/antitermination protein NusA GC:nusA 2163708 2164718 1010 forward
FAM19038-p1-1.1_001936 YlxR family protein 2164787 2164990 203 forward
FAM19038-p1-1.1_001937 translation initiation factor IF-2 GC:infB 2165291 2168317 3026 forward
FAM19038-p1-1.1_001938 30S ribosome-binding factor RbfA GC:rbfA 2168580 2169038 458 forward
FAM19038-p1-1.1_001939 tRNA pseudouridine(55) synthase TruB GC:truB 2169080 2169970 890 forward
FAM19038-p1-1.1_001940 bifunctional riboflavin kinase/FAD synthetase 2170017 2170943 926 forward
FAM19038-p1-1.1_001941 30S ribosomal protein S15 GC:rpsO 2171095 2171358 263 forward
FAM19038-p1-1.1_001942 PadR family transcriptional regulator 2171587 2172216 629 forward
FAM19038-p1-1.1_001943 ABC transporter ATP-binding protein 2172213 2172992 779 forward
FAM19038-p1-1.1_001944 FtsX-like permease family protein 2173145 2175808 2663 forward
FAM19038-p1-1.1_001945 polyribonucleotide nucleotidyltransferase 2176079 2178280 2201 forward
FAM19038-p1-1.1_001946 hypothetical protein 2178455 2178949 494 reverse
FAM19038-p1-1.1_001947 hypothetical protein 2179074 2180834 1760 forward
FAM19038-p1-1.1_001948 response regulator transcription factor 2180825 2181463 638 forward
FAM19038-p1-1.1_001949 4-hydroxy-tetrahydrodipicolinate reductase 2181585 2182325 740 forward
FAM19038-p1-1.1_001950 DUF2993 domain-containing protein 2182333 2183253 920 forward
FAM19038-p1-1.1_001951 pyruvate dehydrogenase 2183383 2185122 1739 forward
FAM19038-p1-1.1_001952 GNAT family N-acetyltransferase 2185170 2185721 551 reverse
FAM19038-p1-1.1_001953 ribonuclease J 2185877 2187565 1688 forward
FAM19038-p1-1.1_001954 50S ribosomal protein L28 2187696 2187881 185 forward
FAM19038-p1-1.1_001955 ATP-dependent DNA helicase RecG 2187928 2190231 2303 forward
FAM19038-p1-1.1_001956 pyridoxamine 5'-phosphate oxidase family protein 2190332 2190754 422 reverse
FAM19038-p1-1.1_001957 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD GC:rsmD 2190892 2191488 596 forward
FAM19038-p1-1.1_001958 pantetheine-phosphate adenylyltransferase GC:coaD 2191485 2191958 473 forward
FAM19038-p1-1.1_001959 DUF177 domain-containing protein 2192099 2192674 575 forward
FAM19038-p1-1.1_001960 50S ribosomal protein L32 GC:rpmF 2192778 2192969 191 forward
FAM19038-p1-1.1_001961 ribonuclease III 2192969 2193739 770 forward
FAM19038-p1-1.1_001962 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase GC:mutM 2193732 2194628 896 forward
FAM19038-p1-1.1_001963 GtrA family protein 2194631 2195215 584 forward
FAM19038-p1-1.1_001964 hypothetical protein 2195336 2195578 242 forward
FAM19038-p1-1.1_001965 signal recognition particle-docking protein FtsY GC:ftsY 2195673 2196866 1193 forward
FAM19038-p1-1.1_001966 glycosyltransferase 2196872 2197990 1118 forward
FAM19038-p1-1.1_001967 EamA family transporter 2198052 2198348 296 forward
FAM19038-p1-1.1_001968 EamA family transporter 2198345 2198680 335 forward
FAM19038-p1-1.1_001969 hypothetical protein 2198708 2200546 1838 forward
FAM19038-p1-1.1_001970 hypothetical protein 2200561 2201703 1142 forward
FAM19038-p1-1.1_001971 signal recognition particle protein GC:ffh 2201772 2203358 1586 forward
FAM19038-p1-1.1_001972 amidohydrolase family protein 2203360 2204550 1190 forward
FAM19038-p1-1.1_001973 30S ribosomal protein S16 GC:rpsP 2204738 2205148 410 forward
FAM19038-p1-1.1_001974 RNA-binding protein 2205150 2205404 254 forward
FAM19038-p1-1.1_001975 ribosome maturation factor RimM GC:rimM 2205495 2206043 548 forward
FAM19038-p1-1.1_001976 tRNA (guanosine(37)-N1)-methyltransferase TrmD GC:trmD 2206059 2206754 695 forward
FAM19038-p1-1.1_001977 succinate dehydrogenase cytochrome b subunit 2206846 2207535 689 forward
FAM19038-p1-1.1_001978 fumarate reductase/succinate dehydrogenase flavoprotein subunit 2207535 2209559 2024 forward
FAM19038-p1-1.1_001979 succinate dehydrogenase/fumarate reductase iron-sulfur subunit 2209556 2210329 773 forward
FAM19038-p1-1.1_001980 hypothetical protein 2210671 2212023 1352 forward
FAM19038-p1-1.1_001981 50S ribosomal protein L19 GC:rplS 2212138 2212491 353 forward
FAM19038-p1-1.1_001982 signal peptidase I GC:lepB 2212827 2213489 662 forward
FAM19038-p1-1.1_001983 ribonuclease HII 2213486 2214124 638 forward
FAM19038-p1-1.1_001984 DUF2469 domain-containing protein 2214121 2214429 308 forward
FAM19038-p1-1.1_001985 YraN family protein 2214570 2215070 500 forward
FAM19038-p1-1.1_001986 YifB family Mg chelatase-like AAA ATPase 2215067 2216593 1526 forward
FAM19038-p1-1.1_001987 DNA-protecting protein DprA GC:dprA 2216590 2217753 1163 forward
FAM19038-p1-1.1_001988 hypothetical protein 2217766 2218329 563 reverse
FAM19038-p1-1.1_001989 AAA family ATPase 2219774 2222074 2300 forward
FAM19038-p1-1.1_001990 XRE family transcriptional regulator 2222105 2222707 602 forward
FAM19038-p1-1.1_001991 split 2/2 IS3 family transposase 2222976 2223907 931 reverse
FAM19038-p1-1.1_001991 split 1/2 IS3 family transposase 2223907 2224231 324 reverse
FAM19038-p1-1.1_001992 hypothetical protein 2224399 2225088 689 reverse
FAM19038-p1-1.1_001993 IS630 family transposase GC:pseudo-gene 2225404 2225787 383 reverse
FAM19038-p1-1.1_001994 IS1380 family transposase 2225939 2227312 1373 reverse
FAM19038-p1-1.1_001995 transposase 2227497 2227784 287 forward
FAM19038-p1-1.1_001996 IS3 family transposase 2227751 2228605 854 forward
FAM19038-p1-1.1_001997 transposase family protein 2228564 2229367 803 reverse
FAM19038-p1-1.1_001998 IS1634 family transposase 2229936 2231579 1643 reverse
FAM19038-p1-1.1_001999 glycosyltransferase family 4 protein GC:pseudo-gene 2231695 2231838 143 forward