contig: FAM19038-p1-1.1_scf1 genome: FAM19038-p1-1.1
species: Acidipropionibacterium thoenii DSM 20276 taxid: 1122998

Metadata

Contig type Scaffold
Is Circular Yes
Is Plasmid No
GC-content 68.7 %
Length 2999408 bp
Gene count 2686

Genes on this contig

Gene ID Product Gene code Start ↑ End Length Strand
FAM19038-p1-1.1_001801 amino acid permease 2017184 2018650 1466 reverse
FAM19038-p1-1.1_001802 metal-dependent transcriptional regulator 2018857 2019615 758 forward
FAM19038-p1-1.1_001803 Nramp family divalent metal transporter 2019761 2021143 1382 reverse
FAM19038-p1-1.1_001804 hypothetical protein 2021373 2021909 536 forward
FAM19038-p1-1.1_001805 oxidoreductase 2022082 2023068 986 forward
FAM19038-p1-1.1_001806 hypothetical protein 2023075 2023446 371 reverse
FAM19038-p1-1.1_001807 hypothetical protein 2023594 2023797 203 forward
FAM19038-p1-1.1_001808 hypothetical protein 2023813 2024457 644 forward
FAM19038-p1-1.1_001809 amino acid racemase 2024627 2025313 686 forward
FAM19038-p1-1.1_001810 deaminase 2025322 2025891 569 reverse
FAM19038-p1-1.1_001811 CocE/NonD family hydrolase 2026066 2027769 1703 forward
FAM19038-p1-1.1_001812 hypothetical protein 2027802 2028209 407 forward
FAM19038-p1-1.1_001813 transglutaminase family protein 2028244 2029047 803 reverse
FAM19038-p1-1.1_001814 AAA family ATPase 2029092 2030108 1016 reverse
FAM19038-p1-1.1_001815 nicotinamide mononucleotide transporter 2030105 2030704 599 reverse
FAM19038-p1-1.1_001816 NUDIX hydrolase 2030797 2031471 674 forward
FAM19038-p1-1.1_001817 rubrerythrin family protein 2031871 2032869 998 forward
FAM19038-p1-1.1_001818 DUF2200 domain-containing protein 2032863 2033261 398 reverse
FAM19038-p1-1.1_001819 class I SAM-dependent methyltransferase 2033271 2033870 599 reverse
FAM19038-p1-1.1_001820 winged helix-turn-helix transcriptional regulator 2034087 2034776 689 reverse
FAM19038-p1-1.1_001821 DHA2 family efflux MFS transporter permease subunit GC:pseudo-gene 2034934 2036274 1340 forward
FAM19038-p1-1.1_001822 tRNA-His 2036476 2036551 75 reverse
FAM19038-p1-1.1_001823 oligoribonuclease GC:orn 2036651 2037274 623 reverse
FAM19038-p1-1.1_001824 tRNA-Arg 2037341 2037416 75 forward
FAM19038-p1-1.1_001825 PrsW family intramembrane metalloprotease 2037621 2038880 1259 forward
FAM19038-p1-1.1_001826 single-stranded DNA-binding protein 2039003 2039611 608 forward
FAM19038-p1-1.1_001827 energy-dependent translational throttle protein EttA GC:ettA 2039826 2041514 1688 forward
FAM19038-p1-1.1_001828 hypothetical protein 2041707 2041970 263 forward
FAM19038-p1-1.1_001829 Na+/H+ antiporter NhaC GC:nhaC 2042054 2043598 1544 reverse
FAM19038-p1-1.1_001830 arginine deiminase 2043642 2044889 1247 reverse
FAM19038-p1-1.1_001831 amino acid permease 2044925 2046397 1472 reverse
FAM19038-p1-1.1_001832 response regulator transcription factor 2046810 2047448 638 forward
FAM19038-p1-1.1_001833 ATP-binding protein 2047449 2048609 1160 forward
FAM19038-p1-1.1_001834 hypothetical protein 2048594 2049604 1010 forward
FAM19038-p1-1.1_001835 IS256 family transposase 2050028 2051287 1259 forward
FAM19038-p1-1.1_001836 DUF222 domain-containing protein 2052636 2054135 1499 forward
FAM19038-p1-1.1_001837 FAD-binding oxidoreductase 2054586 2057447 2861 reverse
FAM19038-p1-1.1_001838 winged helix-turn-helix transcriptional regulator 2057468 2057965 497 reverse
FAM19038-p1-1.1_001839 long-chain fatty acid--CoA ligase 2058285 2060171 1886 forward
FAM19038-p1-1.1_001840 long-chain fatty acid--CoA ligase 2060216 2062135 1919 forward
FAM19038-p1-1.1_001841 thioesterase 2062180 2062992 812 forward
FAM19038-p1-1.1_001842 helix-turn-helix transcriptional regulator 2063071 2063580 509 reverse
FAM19038-p1-1.1_001843 NADP-dependent phosphogluconate dehydrogenase GC:gndA 2063638 2065089 1451 reverse
FAM19038-p1-1.1_001844 hypothetical protein 2065236 2065562 326 forward
FAM19038-p1-1.1_001845 aminopeptidase N GC:pepN 2065636 2068230 2594 reverse
FAM19038-p1-1.1_001846 disulfide bond formation protein DsbA 2068495 2069031 536 forward
FAM19038-p1-1.1_001847 NAD-dependent DNA ligase LigA GC:ligA 2069066 2071294 2228 forward
FAM19038-p1-1.1_001848 GNAT family N-acetyltransferase 2071425 2072027 602 reverse
FAM19038-p1-1.1_001849 GNAT family N-acetyltransferase 2072088 2073407 1319 reverse
FAM19038-p1-1.1_001850 ribose-5-phosphate isomerase 2073467 2073940 473 forward
FAM19038-p1-1.1_001851 hypothetical protein GC:pseudo-gene 2074084 2074269 185 reverse
FAM19038-p1-1.1_001852 Fpg/Nei family DNA glycosylase 2074301 2075116 815 forward
FAM19038-p1-1.1_001853 hypothetical protein 2075113 2076675 1562 forward
FAM19038-p1-1.1_001854 bifunctional lysylphosphatidylglycerol synthetase/lysine--tRNA ligase LysX GC:lysX 2076870 2080121 3251 forward
FAM19038-p1-1.1_001855 alpha/beta hydrolase 2080111 2080947 836 forward
FAM19038-p1-1.1_001856 tRNA-Pro 2081182 2081254 72 forward
FAM19038-p1-1.1_001857 tRNA-Gly 2081346 2081419 73 forward
FAM19038-p1-1.1_001858 trigger factor 2081540 2083123 1583 forward
FAM19038-p1-1.1_001859 AI-2E family transporter 2083273 2084646 1373 forward
FAM19038-p1-1.1_001860 ATP-dependent Clp protease proteolytic subunit 2084780 2085373 593 forward
FAM19038-p1-1.1_001861 ATP-dependent Clp protease proteolytic subunit 2085382 2086107 725 forward
FAM19038-p1-1.1_001862 ATP-dependent Clp protease ATP-binding subunit ClpX GC:clpX 2086315 2087604 1289 forward
FAM19038-p1-1.1_001863 peptidase S41 2087704 2091033 3329 forward
FAM19038-p1-1.1_001864 adenylate kinase GC:pseudo-gene 2091282 2091811 529 forward
FAM19038-p1-1.1_001865 valine--tRNA ligase GC:valS 2091849 2094458 2609 reverse
FAM19038-p1-1.1_001866 thioredoxin domain-containing protein 2094619 2095413 794 reverse
FAM19038-p1-1.1_001867 6-phosphogluconolactonase GC:pgl 2095472 2096206 734 reverse
FAM19038-p1-1.1_001868 glucose-6-phosphate dehydrogenase assembly protein OpcA 2096203 2097279 1076 reverse
FAM19038-p1-1.1_001869 glucose-6-phosphate dehydrogenase 2097302 2098858 1556 reverse
FAM19038-p1-1.1_001870 protoheme IX farnesyltransferase 2099091 2100071 980 forward
FAM19038-p1-1.1_001871 hypothetical protein 2100416 2101447 1031 forward
FAM19038-p1-1.1_001872 heme A synthase 2101521 2102417 896 reverse
FAM19038-p1-1.1_001873 ABC transporter permease 2102405 2103166 761 reverse
FAM19038-p1-1.1_001874 ABC transporter ATP-binding protein 2103168 2103989 821 reverse
FAM19038-p1-1.1_001875 sodium-translocating pyrophosphatase 2104077 2106641 2564 reverse
FAM19038-p1-1.1_001876 LacI family DNA-binding transcriptional regulator 2106930 2107940 1010 reverse
FAM19038-p1-1.1_001877 sugar ABC transporter permease 2107942 2108847 905 reverse
FAM19038-p1-1.1_001878 ABC transporter permease subunit 2108849 2110462 1613 reverse
FAM19038-p1-1.1_001879 extracellular solute-binding protein 2110556 2111809 1253 reverse
FAM19038-p1-1.1_001880 ArsR family transcriptional regulator 2112025 2112768 743 forward
FAM19038-p1-1.1_001881 Fe-S cluster assembly protein SufB GC:sufB 2112857 2114305 1448 forward
FAM19038-p1-1.1_001882 Fe-S cluster assembly protein SufD GC:sufD 2114464 2115564 1100 forward
FAM19038-p1-1.1_001883 non-heme iron oxygenase ferredoxin subunit 2115566 2115901 335 forward
FAM19038-p1-1.1_001884 Fe-S cluster assembly ATPase SufC GC:sufC 2115909 2116676 767 forward
FAM19038-p1-1.1_001885 SufS family cysteine desulfurase GC:sufS 2116676 2117959 1283 forward
FAM19038-p1-1.1_001886 SUF system NifU family Fe-S cluster assembly protein 2117956 2118495 539 forward
FAM19038-p1-1.1_001887 metal-sulfur cluster assembly factor 2118492 2118917 425 forward
FAM19038-p1-1.1_001888 hypothetical protein 2119083 2119976 893 reverse
FAM19038-p1-1.1_001889 helix-turn-helix domain-containing protein 2120055 2120363 308 reverse
FAM19038-p1-1.1_001890 hypothetical protein 2120363 2120857 494 reverse
FAM19038-p1-1.1_001891 hypothetical protein 2121046 2121405 359 reverse
FAM19038-p1-1.1_001892 GNAT family N-acetyltransferase 2121462 2121917 455 forward
FAM19038-p1-1.1_001893 ABC-F family ATP-binding cassette domain-containing protein 2121974 2123572 1598 forward
FAM19038-p1-1.1_001894 hypothetical protein 2123641 2124156 515 forward
FAM19038-p1-1.1_001895 methyltransferase domain-containing protein 2124191 2124874 683 reverse
FAM19038-p1-1.1_001896 SURF1 family protein 2125024 2125932 908 reverse
FAM19038-p1-1.1_001897 DUF3099 domain-containing protein 2125943 2126275 332 reverse
FAM19038-p1-1.1_001898 3-oxoacyl-ACP reductase FabG GC:fabG 2126507 2127232 725 forward
FAM19038-p1-1.1_001899 enoyl-ACP reductase FabI GC:fabI 2127280 2128053 773 forward
FAM19038-p1-1.1_001900 aspartate ammonia-lyase 2128165 2129592 1427 reverse