contig: FAM19038-p1-1.1_scf1 genome: FAM19038-p1-1.1
species: Acidipropionibacterium thoenii DSM 20276 taxid: 1122998

Metadata

Contig type Scaffold
Is Circular Yes
Is Plasmid No
GC-content 68.7 %
Length 2999408 bp
Gene count 2686

Genes on this contig

Gene ID Product Gene code Start ↑ End Length Strand
FAM19038-p1-1.1_001701 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase GC:purH 1915065 1916615 1550 forward
FAM19038-p1-1.1_001702 hypothetical protein 1916724 1917716 992 forward
FAM19038-p1-1.1_001703 MFS transporter 1917739 1919106 1367 reverse
FAM19038-p1-1.1_001704 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase 1919356 1920228 872 forward
FAM19038-p1-1.1_001705 DUF3017 domain-containing protein 1920291 1920524 233 forward
FAM19038-p1-1.1_001706 malate dehydrogenase 1920672 1921655 983 reverse
FAM19038-p1-1.1_001707 formyltetrahydrofolate deformylase GC:purU 1921910 1922785 875 reverse
FAM19038-p1-1.1_001708 NADP-dependent isocitrate dehydrogenase 1923015 1925255 2240 forward
FAM19038-p1-1.1_001709 HlyC/CorC family transporter 1925592 1927121 1529 forward
FAM19038-p1-1.1_001710 phosphotransferase 1927127 1928362 1235 forward
FAM19038-p1-1.1_001711 BMP family ABC transporter substrate-binding protein 1928626 1929738 1112 forward
FAM19038-p1-1.1_001712 ABC transporter ATP-binding protein 1929868 1931490 1622 forward
FAM19038-p1-1.1_001713 ABC transporter permease 1931477 1932808 1331 forward
FAM19038-p1-1.1_001714 ABC transporter permease 1932805 1934175 1370 forward
FAM19038-p1-1.1_001715 cytidine deaminase 1934214 1934654 440 forward
FAM19038-p1-1.1_001716 DUF4440 domain-containing protein 1934651 1935598 947 forward
FAM19038-p1-1.1_001717 methionine--tRNA ligase 1935635 1937425 1790 forward
FAM19038-p1-1.1_001718 uridine kinase 1937445 1938008 563 reverse
FAM19038-p1-1.1_001719 DUF2207 domain-containing protein 1938221 1940104 1883 reverse
FAM19038-p1-1.1_001720 phospho-sugar mutase 1940172 1941845 1673 reverse
FAM19038-p1-1.1_001721 purine-nucleoside phosphorylase 1941890 1942705 815 reverse
FAM19038-p1-1.1_001722 hypothetical protein 1942856 1943608 752 reverse
FAM19038-p1-1.1_001723 ATP-grasp domain-containing protein 1943669 1945444 1775 reverse
FAM19038-p1-1.1_001724 NUDIX domain-containing protein 1945470 1946099 629 forward
FAM19038-p1-1.1_001725 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase 1946238 1947041 803 forward
FAM19038-p1-1.1_001726 SDR family oxidoreductase 1947076 1947780 704 reverse
FAM19038-p1-1.1_001727 arginine deiminase 1947856 1949049 1193 forward
FAM19038-p1-1.1_001728 hypothetical protein 1949072 1949602 530 forward
FAM19038-p1-1.1_001729 septum formation inhibitor Maf 1949657 1950271 614 reverse
FAM19038-p1-1.1_001730 acyl-CoA carboxylase subunit epsilon 1950271 1950474 203 reverse
FAM19038-p1-1.1_001731 acyl-CoA carboxylase subunit beta 1950516 1952090 1574 reverse
FAM19038-p1-1.1_001732 biotin--[acetyl-CoA-carboxylase] ligase 1952261 1953124 863 forward
FAM19038-p1-1.1_001733 peptidase E 1953121 1953837 716 forward
FAM19038-p1-1.1_001734 PH domain-containing protein 1953870 1954397 527 reverse
FAM19038-p1-1.1_001735 5-(carboxyamino)imidazole ribonucleotide synthase 1954562 1955824 1262 forward
FAM19038-p1-1.1_001736 5-(carboxyamino)imidazole ribonucleotide mutase GC:purE 1955817 1956449 632 forward
FAM19038-p1-1.1_001737 LCP family protein 1956537 1957829 1292 reverse
FAM19038-p1-1.1_001738 glycosyltransferase family 2 protein 1957975 1959060 1085 forward
FAM19038-p1-1.1_001739 TIGR03089 family protein GC:pseudo-gene 1959305 1959730 425 reverse
FAM19038-p1-1.1_001740 mannose-1-phosphate guanylyltransferase 1959976 1961052 1076 forward
FAM19038-p1-1.1_001741 hypothetical protein 1961049 1961612 563 forward
FAM19038-p1-1.1_001742 WhiB family transcriptional regulator 1961746 1962003 257 forward
FAM19038-p1-1.1_001743 glycosyltransferase family 2 protein 1962142 1965438 3296 forward
FAM19038-p1-1.1_001744 hypothetical protein 1965438 1966931 1493 forward
FAM19038-p1-1.1_001745 metallopeptidase family protein 1966994 1967416 422 reverse
FAM19038-p1-1.1_001746 DUF3499 domain-containing protein 1967467 1967880 413 forward
FAM19038-p1-1.1_001747 Trm112 family protein GC:pseudo-gene 1968011 1968208 197 forward
FAM19038-p1-1.1_001748 phosphoheptose isomerase 1968331 1969401 1070 forward
FAM19038-p1-1.1_001749 cation diffusion facilitator family transporter 1969398 1970378 980 forward
FAM19038-p1-1.1_001750 type II 3-dehydroquinate dehydratase GC:aroQ 1970381 1970917 536 forward
FAM19038-p1-1.1_001751 DUF3039 domain-containing protein 1971005 1971262 257 reverse
FAM19038-p1-1.1_001752 RDD family protein 1971402 1972358 956 forward
FAM19038-p1-1.1_001753 4-alpha-glucanotransferase GC:malQ 1972410 1974518 2108 forward
FAM19038-p1-1.1_001754 integration host factor 1974665 1974940 275 reverse
FAM19038-p1-1.1_001755 nicotinate phosphoribosyltransferase 1975158 1976495 1337 reverse
FAM19038-p1-1.1_001756 ATP-dependent Clp protease adapter ClpS GC:clpS 1976567 1976905 338 forward
FAM19038-p1-1.1_001757 DUF2017 family protein 1976908 1977516 608 forward
FAM19038-p1-1.1_001758 ferrous iron transport protein A 1977609 1977908 299 forward
FAM19038-p1-1.1_001759 ferrous iron transport protein B GC:feoB 1977968 1980073 2105 forward
FAM19038-p1-1.1_001760 hypothetical protein 1980070 1980450 380 forward
FAM19038-p1-1.1_001761 glutamate racemase 1980476 1981366 890 forward
FAM19038-p1-1.1_001762 ribonuclease PH GC:rph 1981442 1982206 764 forward
FAM19038-p1-1.1_001763 non-canonical purine NTP pyrophosphatase 1982203 1982823 620 forward
FAM19038-p1-1.1_001764 thymidylate synthase 1982825 1983637 812 forward
FAM19038-p1-1.1_001765 dihydrofolate reductase 1983659 1984144 485 forward
FAM19038-p1-1.1_001766 DNA polymerase IV 1984148 1985596 1448 forward
FAM19038-p1-1.1_001767 hypothetical protein 1986692 1986997 305 reverse
FAM19038-p1-1.1_001768 hypothetical protein 1986994 1987335 341 reverse
FAM19038-p1-1.1_001769 hypothetical protein 1987335 1988438 1103 reverse
FAM19038-p1-1.1_001770 hypothetical protein 1988438 1988782 344 reverse
FAM19038-p1-1.1_001771 hypothetical protein 1989307 1990557 1250 reverse
FAM19038-p1-1.1_001772 hypothetical protein 1990709 1990927 218 reverse
FAM19038-p1-1.1_001773 hypothetical protein 1990920 1991108 188 reverse
FAM19038-p1-1.1_001774 glycoside hydrolase family 32 protein 1991101 1991502 401 reverse
FAM19038-p1-1.1_001775 hypothetical protein 1991499 1992068 569 reverse
FAM19038-p1-1.1_001776 helix-turn-helix domain-containing protein 1992065 1992262 197 reverse
FAM19038-p1-1.1_001777 hypothetical protein 1992392 1993054 662 forward
FAM19038-p1-1.1_001778 site-specific integrase 1993051 1994205 1154 reverse
FAM19038-p1-1.1_001779 tRNA-Leu 1994339 1994423 84 reverse
FAM19038-p1-1.1_001780 thioredoxin-dependent thiol peroxidase GC:bcp 1994462 1994941 479 reverse
FAM19038-p1-1.1_001781 DUF3618 domain-containing protein 1995081 1995560 479 forward
FAM19038-p1-1.1_001782 co-chaperone GroES 1995496 1995921 425 forward
FAM19038-p1-1.1_001783 ABC transporter substrate-binding protein 1996051 1997361 1310 forward
FAM19038-p1-1.1_001784 sugar ABC transporter permease 1997358 1998359 1001 forward
FAM19038-p1-1.1_001785 carbohydrate ABC transporter permease 1998356 1999279 923 forward
FAM19038-p1-1.1_001786 glutamine amidotransferase 1999304 2000041 737 reverse
FAM19038-p1-1.1_001787 tRNA-Lys 2000118 2000193 75 reverse
FAM19038-p1-1.1_001788 glutamine amidotransferase 2000274 2001002 728 reverse
FAM19038-p1-1.1_001789 DUF1727 domain-containing protein 2000999 2002300 1301 reverse
FAM19038-p1-1.1_001790 hypothetical protein 2002569 2003138 569 forward
FAM19038-p1-1.1_001791 DNA polymerase Y family protein 2003165 2004817 1652 forward
FAM19038-p1-1.1_001792 error-prone DNA polymerase 2004841 2008284 3443 forward
FAM19038-p1-1.1_001793 ISL3 family transposase GC:pseudo-gene 2008660 2009460 800 reverse
FAM19038-p1-1.1_001794 IS3 family transposase 2009503 2010393 890 reverse
FAM19038-p1-1.1_001795 transposase 2010384 2010671 287 reverse
FAM19038-p1-1.1_001796 glyoxalase/bleomycin resistance/extradiol dioxygenase family protein 2011023 2011454 431 reverse
FAM19038-p1-1.1_001797 amino acid permease 2011551 2013497 1946 reverse
FAM19038-p1-1.1_001798 excinuclease ABC subunit UvrA 2013627 2015972 2345 reverse
FAM19038-p1-1.1_001799 VOC family protein 2016037 2016531 494 forward
FAM19038-p1-1.1_001800 nitroreductase 2016589 2017101 512 forward