contig: FAM19038-p1-1.1_scf1 genome: FAM19038-p1-1.1
species: Acidipropionibacterium thoenii DSM 20276 taxid: 1122998

Metadata

Contig type Scaffold
Is Circular Yes
Is Plasmid No
GC-content 68.7 %
Length 2999408 bp
Gene count 2686

Genes on this contig

Gene ID Product Gene code Start ↑ End Length Strand
FAM19038-p1-1.1_001601 50S ribosomal protein L29 GC:rpmC 1808692 1808934 242 forward
FAM19038-p1-1.1_001602 30S ribosomal protein S17 GC:rpsQ 1808931 1809206 275 forward
FAM19038-p1-1.1_001603 beta-galactosidase 1809317 1811218 1901 reverse
FAM19038-p1-1.1_001604 excinuclease ABC subunit UvrA 1811339 1813840 2501 forward
FAM19038-p1-1.1_001605 50S ribosomal protein L14 GC:rplN 1814143 1814511 368 forward
FAM19038-p1-1.1_001606 50S ribosomal protein L24 1814512 1814880 368 forward
FAM19038-p1-1.1_001607 50S ribosomal protein L5 GC:rplE 1814877 1815512 635 forward
FAM19038-p1-1.1_001608 type Z 30S ribosomal protein S14 1815526 1815711 185 forward
FAM19038-p1-1.1_001609 30S ribosomal protein S8 GC:rpsH 1815905 1816312 407 forward
FAM19038-p1-1.1_001610 50S ribosomal protein L6 GC:rplF 1816344 1816886 542 forward
FAM19038-p1-1.1_001611 50S ribosomal protein L18 GC:rplR 1816886 1817269 383 forward
FAM19038-p1-1.1_001612 30S ribosomal protein S5 GC:rpsE 1817293 1817937 644 forward
FAM19038-p1-1.1_001613 50S ribosomal protein L30 GC:rpmD 1817934 1818116 182 forward
FAM19038-p1-1.1_001614 50S ribosomal protein L15 GC:rplO 1818118 1818558 440 forward
FAM19038-p1-1.1_001615 ABC transporter permease 1818931 1819914 983 forward
FAM19038-p1-1.1_001616 ABC transporter permease 1819925 1820914 989 forward
FAM19038-p1-1.1_001617 ABC transporter ATP-binding protein 1820911 1823025 2114 forward
FAM19038-p1-1.1_001618 ABC transporter family substrate-binding protein 1823252 1824967 1715 forward
FAM19038-p1-1.1_001619 hypothetical protein 1825220 1825894 674 reverse
FAM19038-p1-1.1_001620 preprotein translocase subunit SecY GC:secY 1826038 1827363 1325 forward
FAM19038-p1-1.1_001621 adenylate kinase 1827360 1827929 569 forward
FAM19038-p1-1.1_001622 type I methionyl aminopeptidase GC:map 1827929 1828768 839 forward
FAM19038-p1-1.1_001623 DUF559 domain-containing protein 1829216 1830073 857 forward
FAM19038-p1-1.1_001624 DUF1707 domain-containing protein 1830084 1830452 368 forward
FAM19038-p1-1.1_001625 translation initiation factor IF-1 GC:infA 1830585 1830806 221 forward
FAM19038-p1-1.1_001626 50S ribosomal protein L36 GC:rpmJ 1830898 1831011 113 forward
FAM19038-p1-1.1_001627 30S ribosomal protein S13 GC:rpsM 1831485 1831859 374 forward
FAM19038-p1-1.1_001628 30S ribosomal protein S11 GC:rpsK 1831932 1832339 407 forward
FAM19038-p1-1.1_001629 30S ribosomal protein S4 GC:rpsD 1832375 1832980 605 forward
FAM19038-p1-1.1_001630 DNA-directed RNA polymerase subunit alpha 1833163 1834185 1022 forward
FAM19038-p1-1.1_001631 50S ribosomal protein L17 GC:rplQ 1834465 1835016 551 forward
FAM19038-p1-1.1_001632 glycosyltransferase family 1 protein 1835227 1836411 1184 forward
FAM19038-p1-1.1_001633 hypothetical protein 1836408 1837133 725 forward
FAM19038-p1-1.1_001634 glutamine amidotransferase 1837203 1837889 686 reverse
FAM19038-p1-1.1_001635 superoxide dismutase 1838175 1838792 617 reverse
FAM19038-p1-1.1_001636 ECF transporter S component 1838889 1839806 917 reverse
FAM19038-p1-1.1_001637 ATP-binding cassette domain-containing protein 1839803 1841596 1793 reverse
FAM19038-p1-1.1_001638 energy-coupling factor transporter transmembrane protein EcfT 1841593 1842954 1361 reverse
FAM19038-p1-1.1_001639 methyltransferase 1843936 1844526 590 reverse
FAM19038-p1-1.1_001640 tRNA pseudouridine(38-40) synthase TruA GC:truA 1844526 1845449 923 reverse
FAM19038-p1-1.1_001641 tRNA (guanosine(46)-N7)-methyltransferase TrmB GC:trmB 1845446 1846342 896 reverse
FAM19038-p1-1.1_001642 50S ribosomal protein L13 GC:rplM 1846606 1847058 452 forward
FAM19038-p1-1.1_001643 30S ribosomal protein S9 GC:rpsI 1847081 1847605 524 forward
FAM19038-p1-1.1_001644 phosphoglucosamine mutase 1847816 1849168 1352 forward
FAM19038-p1-1.1_001645 hypothetical protein 1849264 1850088 824 forward
FAM19038-p1-1.1_001646 type I pantothenate kinase 1850102 1851085 983 reverse
FAM19038-p1-1.1_001647 methyltransferase domain-containing protein 1851284 1852108 824 reverse
FAM19038-p1-1.1_001648 glutamine--fructose-6-phosphate transaminase (isomerizing) GC:glmS 1852238 1854085 1847 forward
FAM19038-p1-1.1_001649 holo-ACP synthase 1854236 1854589 353 forward
FAM19038-p1-1.1_001650 ROK family protein 1854600 1855748 1148 forward
FAM19038-p1-1.1_001651 sugar ABC transporter substrate-binding protein 1855891 1857243 1352 reverse
FAM19038-p1-1.1_001652 carbohydrate ABC transporter permease GC:pseudo-gene 1857251 1858197 946 reverse
FAM19038-p1-1.1_001653 sugar ABC transporter permease 1858208 1859125 917 reverse
FAM19038-p1-1.1_001654 alpha-galactosidase 1859172 1861337 2165 reverse
FAM19038-p1-1.1_001655 bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase 1861630 1863087 1457 forward
FAM19038-p1-1.1_001656 glycosyltransferase family 1 protein 1863122 1864273 1151 reverse
FAM19038-p1-1.1_001657 DEAD/DEAH box helicase 1865607 1867058 1451 forward
FAM19038-p1-1.1_001658 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE GC:tsaE 1867120 1868076 956 forward
FAM19038-p1-1.1_001659 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB GC:tsaB 1868076 1868807 731 forward
FAM19038-p1-1.1_001660 GNAT family N-acetyltransferase 1868808 1869449 641 forward
FAM19038-p1-1.1_001661 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD GC:tsaD 1869442 1870485 1043 forward
FAM19038-p1-1.1_001662 hypothetical protein 1870692 1871810 1118 forward
FAM19038-p1-1.1_001663 C1 family peptidase 1871933 1873264 1331 forward
FAM19038-p1-1.1_001664 AmmeMemoRadiSam system radical SAM enzyme GC:amrS 1873786 1874916 1130 reverse
FAM19038-p1-1.1_001665 AmmeMemoRadiSam system protein A GC:amrA 1874913 1875515 602 reverse
FAM19038-p1-1.1_001666 AmmeMemoRadiSam system protein B GC:amrB 1875512 1876354 842 reverse
FAM19038-p1-1.1_001667 8-oxo-dGTP diphosphatase 1876690 1877175 485 forward
FAM19038-p1-1.1_001668 SAM-dependent methyltransferase 1877198 1878397 1199 forward
FAM19038-p1-1.1_001669 SIMPL domain-containing protein 1878513 1879163 650 reverse
FAM19038-p1-1.1_001670 co-chaperone GroES 1879428 1879724 296 forward
FAM19038-p1-1.1_001671 chaperonin GroEL GC:groL 1879737 1881332 1595 forward
FAM19038-p1-1.1_001672 polyprenol phosphomannose-dependent alpha 1-6 mannosyltransferase MptB GC:mptB 1881472 1882986 1514 forward
FAM19038-p1-1.1_001673 IMP dehydrogenase GC:guaB 1883050 1884582 1532 forward
FAM19038-p1-1.1_001674 GuaB3 family IMP dehydrogenase-related protein 1884656 1885762 1106 forward
FAM19038-p1-1.1_001675 zinc-dependent alcohol dehydrogenase family protein 1885906 1886922 1016 reverse
FAM19038-p1-1.1_001676 adenosine deaminase GC:add 1887214 1888248 1034 forward
FAM19038-p1-1.1_001677 chorismate mutase 1888435 1888749 314 forward
FAM19038-p1-1.1_001678 serine O-acetyltransferase GC:cysE 1888863 1889429 566 reverse
FAM19038-p1-1.1_001679 glutamine-hydrolyzing GMP synthase GC:guaA 1889576 1891129 1553 forward
FAM19038-p1-1.1_001680 PspC domain-containing protein 1891259 1891567 308 reverse
FAM19038-p1-1.1_001681 hypothetical protein 1891564 1891794 230 reverse
FAM19038-p1-1.1_001682 PspC domain-containing protein 1891791 1893014 1223 reverse
FAM19038-p1-1.1_001683 PspC domain-containing protein 1893154 1894632 1478 forward
FAM19038-p1-1.1_001684 response regulator transcription factor 1894662 1895345 683 forward
FAM19038-p1-1.1_001685 GlsB/YeaQ/YmgE family stress response membrane protein 1895432 1895692 260 reverse
FAM19038-p1-1.1_001686 phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase family protein 1895777 1897036 1259 reverse
FAM19038-p1-1.1_001687 ABC transporter permease 1897075 1897734 659 reverse
FAM19038-p1-1.1_001688 methionine ABC transporter ATP-binding protein 1897731 1898795 1064 reverse
FAM19038-p1-1.1_001689 methionine ABC transporter substrate-binding protein 1898864 1899847 983 reverse
FAM19038-p1-1.1_001690 DNA helicase PcrA GC:pcrA 1900466 1902928 2462 forward
FAM19038-p1-1.1_001691 M23 family metallopeptidase 1903095 1904201 1106 reverse
FAM19038-p1-1.1_001692 ADP-forming succinate--CoA ligase subunit beta GC:sucC 1904494 1905669 1175 forward
FAM19038-p1-1.1_001693 succinate--CoA ligase subunit alpha GC:sucD 1905673 1906566 893 forward
FAM19038-p1-1.1_001694 hypothetical protein 1906703 1908415 1712 reverse
FAM19038-p1-1.1_001695 hypothetical protein 1908720 1910078 1358 forward
FAM19038-p1-1.1_001696 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD GC:ribD 1910519 1911592 1073 forward
FAM19038-p1-1.1_001697 riboflavin synthase 1911649 1912374 725 forward
FAM19038-p1-1.1_001698 3-4-dihydroxy-2-butanone-4-phosphate synthase GC:ribB 1912371 1913765 1394 forward
FAM19038-p1-1.1_001699 6-7-dimethyl-8-ribityllumazine synthase 1913762 1914253 491 forward
FAM19038-p1-1.1_001700 phosphoribosylglycinamide formyltransferase 1914417 1915016 599 forward