contig: FAM19038-p1-1.1_scf1 genome: FAM19038-p1-1.1
species: Acidipropionibacterium thoenii DSM 20276 taxid: 1122998

Metadata

Contig type Scaffold
Is Circular Yes
Is Plasmid No
GC-content 68.7 %
Length 2999408 bp
Gene count 2686

Genes on this contig

Gene ID Product Gene code Start ↑ End Length Strand
FAM19038-p1-1.1_001501 tRNA-Glu 1700867 1700942 75 reverse
FAM19038-p1-1.1_001502 SH3 domain-containing protein 1701040 1702446 1406 reverse
FAM19038-p1-1.1_001503 hypothetical protein 1702861 1703508 647 reverse
FAM19038-p1-1.1_001504 tRNA-Lys 1703563 1703636 73 forward
FAM19038-p1-1.1_001505 aquaporin Z GC:aqpZ 1703988 1704779 791 reverse
FAM19038-p1-1.1_001506 AAA family ATPase 1705257 1705955 698 forward
FAM19038-p1-1.1_001507 YhgE/Pip domain-containing protein 1705955 1709125 3170 forward
FAM19038-p1-1.1_001508 TetR/AcrR family transcriptional regulator 1709212 1709880 668 forward
FAM19038-p1-1.1_001509 type 2 isopentenyl-diphosphate Delta-isomerase 1709897 1711048 1151 reverse
FAM19038-p1-1.1_001510 phosphomevalonate kinase 1711045 1712151 1106 reverse
FAM19038-p1-1.1_001511 diphosphomevalonate decarboxylase GC:mvaD 1712148 1713143 995 reverse
FAM19038-p1-1.1_001512 mevalonate kinase GC:mvk 1713154 1714110 956 reverse
FAM19038-p1-1.1_001513 N(G)-N(G)-dimethylarginine dimethylaminohydrolase 1714299 1715069 770 reverse
FAM19038-p1-1.1_001514 amino acid permease 1715183 1716640 1457 reverse
FAM19038-p1-1.1_001515 HAD family hydrolase 1716790 1717581 791 forward
FAM19038-p1-1.1_001516 patatin-like phospholipase family protein 1717829 1719397 1568 reverse
FAM19038-p1-1.1_001517 hypothetical protein 1719441 1720295 854 reverse
FAM19038-p1-1.1_001518 cation transporter GC:pseudo-gene 1720533 1721247 714 forward
FAM19038-p1-1.1_001519 galactokinase 1721252 1722454 1202 reverse
FAM19038-p1-1.1_001520 nucleotidyltransferase family protein 1722472 1723377 905 reverse
FAM19038-p1-1.1_001521 cell division protein DedD 1723572 1724024 452 forward
FAM19038-p1-1.1_001522 dihydroxyacetone kinase 1724154 1724594 440 reverse
FAM19038-p1-1.1_001523 dihydroxyacetone kinase subunit L GC:dhaL 1724645 1725274 629 reverse
FAM19038-p1-1.1_001524 dihydroxyacetone kinase subunit DhaK GC:dhaK 1725278 1726279 1001 reverse
FAM19038-p1-1.1_001525 MFS transporter 1726359 1727636 1277 reverse
FAM19038-p1-1.1_001526 1-4-dihydroxy-2-naphthoate polyprenyltransferase 1727898 1728776 878 forward
FAM19038-p1-1.1_001527 antibiotic biosynthesis monooxygenase 1728849 1729133 284 forward
FAM19038-p1-1.1_001528 ABC transporter ATP-binding protein 1729199 1730995 1796 reverse
FAM19038-p1-1.1_001529 TM0106 family RecB-like putative nuclease 1731036 1732871 1835 reverse
FAM19038-p1-1.1_001530 demethylmenaquinone methyltransferase 1732859 1733506 647 reverse
FAM19038-p1-1.1_001531 heme ABC exporter ATP-binding protein CcmA GC:ccmA 1733647 1734291 644 forward
FAM19038-p1-1.1_001532 ABC transporter permease 1734288 1736027 1739 forward
FAM19038-p1-1.1_001533 zinc transporter permease 1736155 1736310 155 reverse
FAM19038-p1-1.1_001534 winged helix-turn-helix transcriptional regulator GC:pseudo-gene 1736353 1736640 287 reverse
FAM19038-p1-1.1_001535 isochorismate synthase 1736749 1737888 1139 reverse
FAM19038-p1-1.1_001536 geranylgeranyl reductase family protein 1738283 1739626 1343 forward
FAM19038-p1-1.1_001537 NADH-quinone oxidoreductase subunit A 1739786 1740154 368 forward
FAM19038-p1-1.1_001538 NADH-quinone oxidoreductase subunit B 1740196 1740771 575 forward
FAM19038-p1-1.1_001539 NADH-quinone oxidoreductase subunit C 1740768 1741496 728 forward
FAM19038-p1-1.1_001540 NADH-quinone oxidoreductase subunit D 1741496 1742812 1316 forward
FAM19038-p1-1.1_001541 NADH-quinone oxidoreductase subunit NuoE GC:nuoE 1742809 1743576 767 forward
FAM19038-p1-1.1_001542 NADH-quinone oxidoreductase subunit NuoF GC:nuoF 1743600 1744958 1358 forward
FAM19038-p1-1.1_001543 NADH-quinone oxidoreductase subunit G 1744955 1747480 2525 forward
FAM19038-p1-1.1_001544 NADH-quinone oxidoreductase subunit NuoH GC:nuoH 1747477 1748859 1382 forward
FAM19038-p1-1.1_001545 NADH-quinone oxidoreductase subunit NuoI GC:nuoI 1748859 1749401 542 forward
FAM19038-p1-1.1_001546 NADH-quinone oxidoreductase subunit J 1749401 1750243 842 forward
FAM19038-p1-1.1_001547 NADH-quinone oxidoreductase subunit NuoK GC:nuoK 1750240 1750539 299 forward
FAM19038-p1-1.1_001548 NADH-quinone oxidoreductase subunit L GC:nuoL 1750614 1752458 1844 forward
FAM19038-p1-1.1_001549 NADH-quinone oxidoreductase subunit M 1752472 1754022 1550 forward
FAM19038-p1-1.1_001550 NADH-quinone oxidoreductase subunit NuoN GC:nuoN 1754040 1755620 1580 forward
FAM19038-p1-1.1_001551 polyprenyl synthetase family protein 1755784 1756758 974 forward
FAM19038-p1-1.1_001552 ethanolamine ammonia-lyase subunit EutB 1756929 1758344 1415 forward
FAM19038-p1-1.1_001553 ethanolamine ammonia-lyase subunit EutC GC:eutC 1758341 1759216 875 forward
FAM19038-p1-1.1_001554 CoA ester lyase 1759305 1760129 824 forward
FAM19038-p1-1.1_001555 peptidase M13 1760196 1762190 1994 reverse
FAM19038-p1-1.1_001556 PrsW family intramembrane metalloprotease 1762204 1763010 806 reverse
FAM19038-p1-1.1_001557 2-oxoacid:ferredoxin oxidoreductase subunit beta 1763064 1764254 1190 reverse
FAM19038-p1-1.1_001558 2-oxoacid:acceptor oxidoreductase subunit alpha 1764251 1766257 2006 reverse
FAM19038-p1-1.1_001559 polyprenol phosphomannose-dependent alpha 1-6 mannosyltransferase MptB GC:mptB 1766474 1768018 1544 forward
FAM19038-p1-1.1_001560 enoyl-CoA hydratase/isomerase family protein 1768015 1768944 929 forward
FAM19038-p1-1.1_001561 exodeoxyribonuclease III 1768976 1769863 887 forward
FAM19038-p1-1.1_001562 two pore domain potassium channel family protein 1769851 1770483 632 reverse
FAM19038-p1-1.1_001563 YajQ family cyclic di-GMP-binding protein 1770545 1771039 494 reverse
FAM19038-p1-1.1_001564 tRNA-Tyr 1771217 1771298 81 forward
FAM19038-p1-1.1_001565 tRNA-Thr 1771472 1771544 72 forward
FAM19038-p1-1.1_001566 tRNA-Met 1771609 1771683 74 forward
FAM19038-p1-1.1_001567 50S ribosomal protein L33 GC:rpmG 1771742 1771912 170 forward
FAM19038-p1-1.1_001568 MaoC family dehydratase 1772081 1772527 446 forward
FAM19038-p1-1.1_001569 dehydratase 1772524 1772961 437 forward
FAM19038-p1-1.1_001570 UDP-N-acetylmuramate dehydrogenase 1772958 1774115 1157 forward
FAM19038-p1-1.1_001571 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme 1774230 1775495 1265 forward
FAM19038-p1-1.1_001572 tRNA-Trp 1775640 1775712 72 forward
FAM19038-p1-1.1_001573 preprotein translocase subunit SecE GC:secE 1775830 1776480 650 forward
FAM19038-p1-1.1_001574 transcription termination/antitermination protein NusG GC:nusG 1776558 1777475 917 forward
FAM19038-p1-1.1_001575 50S ribosomal protein L11 GC:rplK 1777624 1778055 431 forward
FAM19038-p1-1.1_001576 50S ribosomal protein L1 GC:rplA 1778182 1778883 701 forward
FAM19038-p1-1.1_001577 50S ribosomal protein L10 GC:rplJ 1779329 1779907 578 forward
FAM19038-p1-1.1_001578 50S ribosomal protein L7/L12 GC:rplL 1779979 1780368 389 forward
FAM19038-p1-1.1_001579 DNA-directed RNA polymerase subunit beta 1780694 1784176 3482 forward
FAM19038-p1-1.1_001580 DNA-directed RNA polymerase subunit beta' 1784401 1788279 3878 forward
FAM19038-p1-1.1_001581 hypothetical protein 1788460 1789515 1055 forward
FAM19038-p1-1.1_001582 Gfo/Idh/MocA family oxidoreductase 1789529 1790548 1019 reverse
FAM19038-p1-1.1_001583 30S ribosomal protein S12 1790808 1791179 371 forward
FAM19038-p1-1.1_001584 30S ribosomal protein S7 GC:rpsG 1791183 1791653 470 forward
FAM19038-p1-1.1_001585 elongation factor G GC:fusA 1791872 1793965 2093 forward
FAM19038-p1-1.1_001586 elongation factor Tu GC:tuf 1794254 1795447 1193 forward
FAM19038-p1-1.1_001587 hypothetical protein 1795575 1797386 1811 reverse
FAM19038-p1-1.1_001588 DUF664 domain-containing protein 1797383 1797913 530 reverse
FAM19038-p1-1.1_001589 bifunctional metallophosphatase/5'-nucleotidase 1797944 1799722 1778 reverse
FAM19038-p1-1.1_001590 glutamine--tRNA ligase/YqeY domain fusion protein 1799733 1801484 1751 reverse
FAM19038-p1-1.1_001591 glutamate--tRNA ligase 1801591 1803081 1490 forward
FAM19038-p1-1.1_001592 30S ribosomal protein S10 GC:rpsJ 1803598 1803909 311 forward
FAM19038-p1-1.1_001593 50S ribosomal protein L3 GC:rplC 1803921 1804592 671 forward
FAM19038-p1-1.1_001594 50S ribosomal protein L4 1804589 1805488 899 forward
FAM19038-p1-1.1_001595 50S ribosomal protein L23 GC:rplW 1805485 1805793 308 forward
FAM19038-p1-1.1_001596 50S ribosomal protein L2 GC:rplB 1805827 1806663 836 forward
FAM19038-p1-1.1_001597 30S ribosomal protein S19 GC:rpsS 1806679 1806960 281 forward
FAM19038-p1-1.1_001598 50S ribosomal protein L22 GC:rplV 1806979 1807446 467 forward
FAM19038-p1-1.1_001599 30S ribosomal protein S3 GC:rpsC 1807450 1808271 821 forward
FAM19038-p1-1.1_001600 50S ribosomal protein L16 GC:rplP 1808273 1808692 419 forward