contig: FAM19038-p1-1.1_scf1 genome: FAM19038-p1-1.1
species: Acidipropionibacterium thoenii DSM 20276 taxid: 1122998

Metadata

Contig type Scaffold
Is Circular Yes
Is Plasmid No
GC-content 68.7 %
Length 2999408 bp
Gene count 2686

Genes on this contig

Gene ID Product Gene code Start ↑ End Length Strand
FAM19038-p1-1.1_001401 type B 50S ribosomal protein L31 1596106 1596351 245 forward
FAM19038-p1-1.1_001402 50S ribosomal protein L28 GC:rpmB 1596832 1597107 275 reverse
FAM19038-p1-1.1_001403 phosphate ABC transporter ATP-binding protein 1597531 1598307 776 reverse
FAM19038-p1-1.1_001404 phosphate ABC transporter permease PstA GC:pstA 1598354 1599373 1019 reverse
FAM19038-p1-1.1_001405 phosphate ABC transporter permease subunit PstC GC:pstC 1599370 1600413 1043 reverse
FAM19038-p1-1.1_001406 phosphate ABC transporter substrate-binding protein PstS GC:pstS 1600548 1601705 1157 reverse
FAM19038-p1-1.1_001407 NUDIX hydrolase 1601935 1602846 911 reverse
FAM19038-p1-1.1_001408 RNA degradosome polyphosphate kinase 1602843 1604990 2147 reverse
FAM19038-p1-1.1_001409 response regulator transcription factor 1605129 1605827 698 reverse
FAM19038-p1-1.1_001410 hypothetical protein 1606011 1606499 488 forward
FAM19038-p1-1.1_001411 LLM class flavin-dependent oxidoreductase 1606573 1607628 1055 reverse
FAM19038-p1-1.1_001412 MFS transporter 1607691 1609172 1481 reverse
FAM19038-p1-1.1_001413 D-tyrosyl-tRNA(Tyr) deacylase 1609328 1609765 437 reverse
FAM19038-p1-1.1_001414 hypothetical protein 1609762 1609992 230 reverse
FAM19038-p1-1.1_001415 FABP family protein 1610208 1610705 497 forward
FAM19038-p1-1.1_001416 folate-binding protein YgfZ 1610702 1611670 968 forward
FAM19038-p1-1.1_001417 sugar transferase 1611702 1613114 1412 forward
FAM19038-p1-1.1_001418 isochorismatase family protein 1613158 1613703 545 reverse
FAM19038-p1-1.1_001419 L-D-transpeptidase family protein 1613888 1615174 1286 reverse
FAM19038-p1-1.1_001420 SH3 domain-containing protein 1615299 1616408 1109 reverse
FAM19038-p1-1.1_001421 translational GTPase TypA GC:typA 1616597 1618459 1862 reverse
FAM19038-p1-1.1_001422 MFS transporter 1618677 1619849 1172 forward
FAM19038-p1-1.1_001423 GNAT family N-acetyltransferase 1619855 1620352 497 forward
FAM19038-p1-1.1_001424 IS1634 family transposase 1620917 1622560 1643 reverse
FAM19038-p1-1.1_001425 ISL3 family transposase 1622956 1624263 1307 reverse
FAM19038-p1-1.1_001426 hypothetical protein 1625104 1625502 398 forward
FAM19038-p1-1.1_001427 ISL3-like element ISPfr1 family transposase GC:pseudo-gene 1625594 1626205 611 reverse
FAM19038-p1-1.1_001428 ISL3 family transposase 1626328 1627083 755 forward
FAM19038-p1-1.1_001429 SIS domain-containing protein 1627045 1627476 431 reverse
FAM19038-p1-1.1_001430 transposase 1627614 1627901 287 forward
FAM19038-p1-1.1_001431 IS3 family transposase 1627892 1628782 890 forward
FAM19038-p1-1.1_001432 IS1380 family transposase 1628904 1630277 1373 forward
FAM19038-p1-1.1_001433 ISL3-like element ISPfr1 family transposase 1630628 1631935 1307 forward
FAM19038-p1-1.1_001434 MurR/RpiR family transcriptional regulator 1631918 1632247 329 reverse
FAM19038-p1-1.1_001435 DUF4981 domain-containing protein 1632704 1635772 3068 forward
FAM19038-p1-1.1_001436 MFS transporter 1635795 1637183 1388 forward
FAM19038-p1-1.1_001437 UDP-glucose 4-epimerase GalE GC:galE 1637229 1638224 995 forward
FAM19038-p1-1.1_001438 ISL3 family transposase 1638467 1639777 1310 forward
FAM19038-p1-1.1_001439 ISL3-like element ISPfr1 family transposase GC:pseudo-gene 1639780 1640484 704 reverse
FAM19038-p1-1.1_001440 transposase 1640580 1640867 287 forward
FAM19038-p1-1.1_001441 IS3 family transposase 1640858 1641748 890 forward
FAM19038-p1-1.1_001442 IS1634 family transposase 1641921 1643564 1643 reverse
FAM19038-p1-1.1_001443 transposase family protein GC:pseudo-gene 1644140 1644391 251 forward
FAM19038-p1-1.1_001444 hypothetical protein 1644570 1644797 227 forward
FAM19038-p1-1.1_001445 type II toxin-antitoxin system PemK/MazF family toxin 1644790 1645125 335 forward
FAM19038-p1-1.1_001446 hypothetical protein 1645260 1645448 188 reverse
FAM19038-p1-1.1_001447 FAD-dependent oxidoreductase 1645559 1647178 1619 forward
FAM19038-p1-1.1_001448 metal-sensitive transcriptional regulator 1647210 1647473 263 reverse
FAM19038-p1-1.1_001449 DUF3151 domain-containing protein 1647636 1648247 611 forward
FAM19038-p1-1.1_001450 GNAT family N-acetyltransferase 1648276 1649121 845 forward
FAM19038-p1-1.1_001451 adenylosuccinate synthase 1649313 1650599 1286 forward
FAM19038-p1-1.1_001452 EamA family transporter 1650580 1651548 968 reverse
FAM19038-p1-1.1_001453 phosphoribosylamine--glycine ligase GC:purD 1651672 1653015 1343 forward
FAM19038-p1-1.1_001454 adenylosuccinate lyase 1653098 1654531 1433 forward
FAM19038-p1-1.1_001455 hydrogen peroxide-inducible genes activator 1654519 1655442 923 reverse
FAM19038-p1-1.1_001456 alkyl hydroperoxide reductase subunit F GC:ahpF 1655460 1657040 1580 reverse
FAM19038-p1-1.1_001457 peroxiredoxin GC:ahpC 1657166 1657729 563 reverse
FAM19038-p1-1.1_001458 phosphoribosylaminoimidazolesuccinocarboxamide synthase 1657913 1659100 1187 forward
FAM19038-p1-1.1_001459 phosphoribosylformylglycinamidine synthase subunit PurQ GC:purQ 1659102 1659779 677 forward
FAM19038-p1-1.1_001460 amino acid permease 1659904 1661292 1388 forward
FAM19038-p1-1.1_001461 asparaginase 1661312 1662310 998 forward
FAM19038-p1-1.1_001462 MFS transporter GC:pseudo-gene 1662355 1663666 1311 reverse
FAM19038-p1-1.1_001463 aspartate aminotransferase family protein 1663875 1665290 1415 forward
FAM19038-p1-1.1_001464 methylmalonyl Co-A mutase-associated GTPase MeaB GC:meaB 1665487 1666395 908 forward
FAM19038-p1-1.1_001465 IS481-like element ISPfr15 family transposase 1666462 1667466 1004 forward
FAM19038-p1-1.1_001466 phosphoribosylformylglycinamidine synthase subunit PurL GC:purL 1667689 1669947 2258 forward
FAM19038-p1-1.1_001467 nitric-oxide reductase large subunit GC:pseudo-gene 1670079 1672316 2237 forward
FAM19038-p1-1.1_001468 hypothetical protein 1672394 1673137 743 forward
FAM19038-p1-1.1_001469 slipin family protein 1673134 1673937 803 forward
FAM19038-p1-1.1_001470 dipeptidase 1674055 1675413 1358 forward
FAM19038-p1-1.1_001471 MFS transporter 1675674 1676966 1292 forward
FAM19038-p1-1.1_001472 amidophosphoribosyltransferase 1676998 1678518 1520 forward
FAM19038-p1-1.1_001473 phosphoribosylformylglycinamidine cyclo-ligase 1678515 1679660 1145 forward
FAM19038-p1-1.1_001474 DUF3073 domain-containing protein 1679771 1679980 209 forward
FAM19038-p1-1.1_001475 alpha/beta hydrolase 1680029 1680979 950 forward
FAM19038-p1-1.1_001476 extracellular solute-binding protein 1681170 1682486 1316 forward
FAM19038-p1-1.1_001477 sugar ABC transporter permease 1682610 1683506 896 forward
FAM19038-p1-1.1_001478 carbohydrate ABC transporter permease 1683506 1684402 896 forward
FAM19038-p1-1.1_001479 branched-chain amino acid ABC transporter permease 1684659 1686068 1409 forward
FAM19038-p1-1.1_001480 branched-chain amino acid ABC transporter permease 1686082 1687074 992 forward
FAM19038-p1-1.1_001481 ABC transporter ATP-binding protein 1687067 1688134 1067 forward
FAM19038-p1-1.1_001482 ABC transporter ATP-binding protein 1688131 1688865 734 forward
FAM19038-p1-1.1_001483 hypothetical protein 1689010 1689492 482 reverse
FAM19038-p1-1.1_001484 ABC transporter substrate-binding protein 1689620 1690927 1307 reverse
FAM19038-p1-1.1_001485 tRNA-Phe 1691188 1691261 73 reverse
FAM19038-p1-1.1_001486 tRNA-Asp 1691326 1691399 73 reverse
FAM19038-p1-1.1_001487 hypothetical protein 1691805 1692035 230 reverse
FAM19038-p1-1.1_001488 phage major capsid protein 1692512 1693354 842 reverse
FAM19038-p1-1.1_001489 hypothetical protein 1693542 1694126 584 reverse
FAM19038-p1-1.1_001490 hypothetical protein 1694131 1694454 323 reverse
FAM19038-p1-1.1_001491 hypothetical protein 1694471 1694671 200 reverse
FAM19038-p1-1.1_001492 DUF3631 domain-containing protein 1695014 1696309 1295 reverse
FAM19038-p1-1.1_001493 hypothetical protein 1696306 1696758 452 reverse
FAM19038-p1-1.1_001494 hypothetical protein 1696811 1697074 263 reverse
FAM19038-p1-1.1_001495 hypothetical protein 1697071 1697661 590 reverse
FAM19038-p1-1.1_001496 hypothetical protein 1697658 1698455 797 reverse
FAM19038-p1-1.1_001497 hypothetical protein 1698539 1698745 206 reverse
FAM19038-p1-1.1_001498 helix-turn-helix domain-containing protein 1698805 1699059 254 reverse
FAM19038-p1-1.1_001499 helix-turn-helix transcriptional regulator 1699199 1699729 530 forward
FAM19038-p1-1.1_001500 site-specific integrase 1699692 1700855 1163 forward