contig: FAM19038-p1-1.1_scf1 genome: FAM19038-p1-1.1
species: Acidipropionibacterium thoenii DSM 20276 taxid: 1122998

Metadata

Contig type Scaffold
Is Circular Yes
Is Plasmid No
GC-content 68.7 %
Length 2999408 bp
Gene count 2686

Genes on this contig

Gene ID Product Gene code Start ↑ End Length Strand
FAM19038-p1-1.1_001301 DUF1269 domain-containing protein 1484377 1484853 476 forward
FAM19038-p1-1.1_001302 alcohol dehydrogenase catalytic domain-containing protein 1485016 1486059 1043 forward
FAM19038-p1-1.1_001303 hypothetical protein 1486164 1486676 512 reverse
FAM19038-p1-1.1_001304 NAD(P)-binding protein 1486986 1488335 1349 forward
FAM19038-p1-1.1_001305 NAD(P)H-dependent oxidoreductase 1488360 1488935 575 reverse
FAM19038-p1-1.1_001306 beta-lactamase family protein 1489084 1490610 1526 reverse
FAM19038-p1-1.1_001307 type 1 glutamine amidotransferase 1490694 1491416 722 reverse
FAM19038-p1-1.1_001308 membrane dipeptidase 1491416 1492513 1097 reverse
FAM19038-p1-1.1_001309 aminodeoxychorismate lyase 1492518 1493390 872 reverse
FAM19038-p1-1.1_001310 ABC transporter substrate-binding protein 1493845 1495689 1844 forward
FAM19038-p1-1.1_001311 ABC transporter permease 1495816 1496847 1031 forward
FAM19038-p1-1.1_001312 ABC transporter permease 1496895 1497770 875 forward
FAM19038-p1-1.1_001313 ABC transporter ATP-binding protein 1497774 1499432 1658 forward
FAM19038-p1-1.1_001314 LD-carboxypeptidase 1499429 1500499 1070 forward
FAM19038-p1-1.1_001315 Lrp/AsnC family transcriptional regulator 1500501 1500959 458 forward
FAM19038-p1-1.1_001316 serine hydrolase 1501024 1501899 875 forward
FAM19038-p1-1.1_001317 cysteine protease 1501896 1502954 1058 forward
FAM19038-p1-1.1_001318 serine hydrolase 1502951 1503787 836 forward
FAM19038-p1-1.1_001319 P-II family nitrogen regulator 1503998 1504336 338 reverse
FAM19038-p1-1.1_001320 ammonium transporter 1504333 1505691 1358 reverse
FAM19038-p1-1.1_001321 hypothetical protein 1505853 1506803 950 reverse
FAM19038-p1-1.1_001322 hypothetical protein 1506920 1507699 779 forward
FAM19038-p1-1.1_001323 phosphoglycerate mutase 1507748 1508236 488 reverse
FAM19038-p1-1.1_001324 acetylxylan esterase 1508357 1509358 1001 forward
FAM19038-p1-1.1_001325 site-specific DNA-methyltransferase 1509399 1510415 1016 reverse
FAM19038-p1-1.1_001326 inorganic diphosphatase 1510562 1511122 560 reverse
FAM19038-p1-1.1_001327 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase GC:dacB 1511193 1512668 1475 forward
FAM19038-p1-1.1_001328 tRNA lysidine(34) synthetase TilS GC:tilS 1512732 1513736 1004 forward
FAM19038-p1-1.1_001329 hypoxanthine phosphoribosyltransferase GC:hpt 1513806 1514357 551 forward
FAM19038-p1-1.1_001330 ATP-dependent zinc metalloprotease FtsH GC:hflB 1514436 1516709 2273 forward
FAM19038-p1-1.1_001331 GTP cyclohydrolase I FolE GC:folE 1516772 1517380 608 forward
FAM19038-p1-1.1_001332 dihydropteroate synthase GC:folP 1517429 1518292 863 forward
FAM19038-p1-1.1_001333 dihydroneopterin aldolase GC:folB 1518364 1518756 392 forward
FAM19038-p1-1.1_001334 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase GC:folK 1518747 1519307 560 forward
FAM19038-p1-1.1_001335 DUF3180 domain-containing protein 1519304 1519864 560 forward
FAM19038-p1-1.1_001336 cell division topological specificity factor MinE 1519964 1520632 668 forward
FAM19038-p1-1.1_001337 Lsr2 family protein 1521164 1521484 320 forward
FAM19038-p1-1.1_001338 ATP-dependent Clp protease ATP-binding subunit 1521816 1524362 2546 forward
FAM19038-p1-1.1_001339 DUF3883 domain-containing protein 1524475 1525323 848 forward
FAM19038-p1-1.1_001340 hypothetical protein 1525483 1527303 1820 forward
FAM19038-p1-1.1_001341 hypothetical protein 1527303 1528190 887 forward
FAM19038-p1-1.1_001342 hypothetical protein 1528187 1528966 779 forward
FAM19038-p1-1.1_001343 pyrimidine dimer DNA glycosylase 1529003 1529437 434 reverse
FAM19038-p1-1.1_001344 MMPL family transporter 1529434 1531602 2168 reverse
FAM19038-p1-1.1_001345 TIGR01777 family protein 1531708 1532607 899 forward
FAM19038-p1-1.1_001346 rhomboid family intramembrane serine protease 1532604 1533293 689 forward
FAM19038-p1-1.1_001347 cobalt ABC transporter 1533400 1533900 500 reverse
FAM19038-p1-1.1_001348 thiamine ABC transporter substrate-binding protein 1534639 1535721 1082 forward
FAM19038-p1-1.1_001349 iron ABC transporter permease 1535685 1537385 1700 forward
FAM19038-p1-1.1_001350 ABC transporter ATP-binding protein 1537436 1538473 1037 forward
FAM19038-p1-1.1_001351 ParB N-terminal domain-containing protein 1538524 1538889 365 forward
FAM19038-p1-1.1_001352 MFS transporter 1538894 1540324 1430 reverse
FAM19038-p1-1.1_001353 FAD-dependent oxidoreductase 1540570 1542924 2354 reverse
FAM19038-p1-1.1_001354 LacI family transcriptional regulator 1543096 1544121 1025 reverse
FAM19038-p1-1.1_001355 catalase 1544225 1545673 1448 reverse
FAM19038-p1-1.1_001356 A/G-specific adenine glycosylase 1545892 1546662 770 reverse
FAM19038-p1-1.1_001357 glutamate-1-semialdehyde 2-1-aminomutase GC:hemL 1546813 1548129 1316 reverse
FAM19038-p1-1.1_001358 porphobilinogen synthase GC:hemB 1548267 1549277 1010 reverse
FAM19038-p1-1.1_001359 uroporphyrinogen-III synthase 1549274 1550026 752 reverse
FAM19038-p1-1.1_001360 hydroxymethylbilane synthase GC:hemC 1550032 1551087 1055 reverse
FAM19038-p1-1.1_001361 NAD(P)-binding protein 1551236 1552636 1400 reverse
FAM19038-p1-1.1_001362 uroporphyrinogen decarboxylase GC:hemE 1552716 1553855 1139 reverse
FAM19038-p1-1.1_001363 glutamyl-tRNA reductase 1554075 1555559 1484 forward
FAM19038-p1-1.1_001364 ferrochelatase 1555556 1557712 2156 forward
FAM19038-p1-1.1_001365 hypothetical protein 1557870 1558622 752 forward
FAM19038-p1-1.1_001366 helix-turn-helix transcriptional regulator 1558664 1558891 227 reverse
FAM19038-p1-1.1_001367 hypothetical protein 1558893 1559537 644 reverse
FAM19038-p1-1.1_001368 DNA integrity scanning protein DisA GC:disA 1559651 1560745 1094 reverse
FAM19038-p1-1.1_001369 DNA repair protein RadA GC:radA 1560771 1562189 1418 reverse
FAM19038-p1-1.1_001370 VOC family protein 1562363 1563001 638 reverse
FAM19038-p1-1.1_001371 sugar phosphate isomerase/epimerase 1563163 1564002 839 forward
FAM19038-p1-1.1_001372 proline dehydrogenase 1564031 1564945 914 forward
FAM19038-p1-1.1_001373 CPBP family intramembrane metalloprotease 1565080 1566063 983 forward
FAM19038-p1-1.1_001374 aspartate-semialdehyde dehydrogenase 1566195 1567238 1043 forward
FAM19038-p1-1.1_001375 pyrroline-5-carboxylate reductase GC:proC 1567235 1568038 803 forward
FAM19038-p1-1.1_001376 AURKAIP1/COX24 domain-containing protein 1568267 1568368 101 forward
FAM19038-p1-1.1_001377 glutaredoxin family protein 1568445 1568747 302 forward
FAM19038-p1-1.1_001378 bifunctional uroporphyrinogen-III C-methyltransferase/uroporphyrinogen-III synthase 1569032 1570669 1637 forward
FAM19038-p1-1.1_001379 histidine phosphatase family protein 1570799 1571521 722 forward
FAM19038-p1-1.1_001380 TlpA family protein disulfide reductase 1571518 1572087 569 forward
FAM19038-p1-1.1_001381 cytochrome C biogenesis protein 1572162 1572893 731 forward
FAM19038-p1-1.1_001382 cytochrome c biogenesis protein ResB 1573000 1574559 1559 forward
FAM19038-p1-1.1_001383 c-type cytochrome biogenesis protein CcsB GC:ccsB 1574556 1575485 929 forward
FAM19038-p1-1.1_001384 hypothetical protein 1575500 1577041 1541 forward
FAM19038-p1-1.1_001385 SDR family oxidoreductase 1577076 1577897 821 reverse
FAM19038-p1-1.1_001386 sodium:proton antiporter 1577942 1579741 1799 reverse
FAM19038-p1-1.1_001387 threonine ammonia-lyase- biosynthetic GC:ilvA 1579768 1581285 1517 reverse
FAM19038-p1-1.1_001388 dihydroxy-acid dehydratase GC:ilvD 1581369 1583354 1985 reverse
FAM19038-p1-1.1_001389 DUF5134 domain-containing protein 1583588 1584322 734 reverse
FAM19038-p1-1.1_001390 mycothione reductase 1584471 1585889 1418 forward
FAM19038-p1-1.1_001391 siderophore-interacting protein 1585930 1586892 962 reverse
FAM19038-p1-1.1_001392 ABC transporter ATP-binding protein 1586889 1587827 938 reverse
FAM19038-p1-1.1_001393 iron chelate uptake ABC transporter family permease subunit 1587824 1588768 944 reverse
FAM19038-p1-1.1_001394 iron ABC transporter permease 1588858 1589934 1076 reverse
FAM19038-p1-1.1_001395 iron-siderophore ABC transporter substrate-binding protein 1589931 1591037 1106 reverse
FAM19038-p1-1.1_001396 ABC transporter ATP-binding protein 1591578 1593362 1784 forward
FAM19038-p1-1.1_001397 ABC transporter ATP-binding protein 1593359 1595098 1739 forward
FAM19038-p1-1.1_001398 50S ribosomal protein L32 GC:rpmF 1595172 1595342 170 reverse
FAM19038-p1-1.1_001399 30S ribosomal protein S14 GC:rpsN 1595347 1595652 305 reverse
FAM19038-p1-1.1_001400 50S ribosomal protein L33 GC:rpmG 1595652 1595822 170 reverse