contig: FAM19038-p1-1.1_scf1 genome: FAM19038-p1-1.1
species: Acidipropionibacterium thoenii DSM 20276 taxid: 1122998

Metadata

Contig type Scaffold
Is Circular Yes
Is Plasmid No
GC-content 68.7 %
Length 2999408 bp
Gene count 2686

Genes on this contig

Gene ID Product Gene code Start ↑ End Length Strand
FAM19038-p1-1.1_001101 DUF2252 domain-containing protein 1260296 1261657 1361 reverse
FAM19038-p1-1.1_001102 hypothetical protein 1261810 1262187 377 forward
FAM19038-p1-1.1_001103 GNAT family N-acetyltransferase 1262234 1263754 1520 reverse
FAM19038-p1-1.1_001104 mandelate racemase/muconate lactonizing enzyme family protein 1263762 1264943 1181 reverse
FAM19038-p1-1.1_001105 glutathione S-transferase 1264998 1266122 1124 reverse
FAM19038-p1-1.1_001106 glutathione S-transferase 1266124 1267224 1100 reverse
FAM19038-p1-1.1_001107 glutathione S-transferase family protein 1267293 1268315 1022 reverse
FAM19038-p1-1.1_001108 cysteine synthase family protein 1268312 1269361 1049 reverse
FAM19038-p1-1.1_001109 cobalamin-independent methionine synthase II family protein 1269866 1271122 1256 reverse
FAM19038-p1-1.1_001110 ABC transporter substrate-binding protein 1271119 1272834 1715 reverse
FAM19038-p1-1.1_001111 ABC transporter ATP-binding protein 1272899 1274722 1823 reverse
FAM19038-p1-1.1_001112 ABC transporter permease 1274719 1275579 860 reverse
FAM19038-p1-1.1_001113 ABC transporter permease 1275582 1276589 1007 reverse
FAM19038-p1-1.1_001114 HAD-IA family hydrolase 1277154 1277831 677 reverse
FAM19038-p1-1.1_001115 DUF393 domain-containing protein 1278086 1278478 392 forward
FAM19038-p1-1.1_001116 hypothetical protein 1278480 1278752 272 reverse
FAM19038-p1-1.1_001117 MarP family serine protease 1278797 1280002 1205 reverse
FAM19038-p1-1.1_001118 isopentenyl-diphosphate Delta-isomerase GC:idi 1280161 1280775 614 forward
FAM19038-p1-1.1_001119 YibE/F family protein 1280784 1282142 1358 reverse
FAM19038-p1-1.1_001120 HAMP domain-containing histidine kinase 1282139 1283521 1382 reverse
FAM19038-p1-1.1_001121 response regulator transcription factor 1283572 1284282 710 reverse
FAM19038-p1-1.1_001122 peptidase S51 1284296 1285180 884 reverse
FAM19038-p1-1.1_001123 low molecular weight phosphotyrosine protein phosphatase 1285177 1285662 485 reverse
FAM19038-p1-1.1_001124 ABC transporter ATP-binding protein 1285801 1287708 1907 forward
FAM19038-p1-1.1_001125 ABC transporter ATP-binding protein 1287783 1289600 1817 forward
FAM19038-p1-1.1_001126 ROK family protein 1289679 1290953 1274 reverse
FAM19038-p1-1.1_001127 extracellular solute-binding protein 1291180 1292427 1247 forward
FAM19038-p1-1.1_001128 sugar ABC transporter permease 1292452 1293378 926 forward
FAM19038-p1-1.1_001129 carbohydrate ABC transporter permease 1293393 1294259 866 forward
FAM19038-p1-1.1_001130 glycoside hydrolase family 13 protein 1294374 1296110 1736 forward
FAM19038-p1-1.1_001131 DivIVA domain-containing protein 1296115 1296417 302 reverse
FAM19038-p1-1.1_001132 MgtC/SapB family protein 1296416 1297138 722 forward
FAM19038-p1-1.1_001133 glycoside hydrolase 1297226 1299679 2453 forward
FAM19038-p1-1.1_001134 MurR/RpiR family transcriptional regulator 1299700 1300551 851 reverse
FAM19038-p1-1.1_001135 metallophosphatase 1300548 1301414 866 reverse
FAM19038-p1-1.1_001136 HAD family hydrolase 1301416 1302144 728 reverse
FAM19038-p1-1.1_001137 MFS transporter GC:pseudo-gene 1302479 1303123 644 forward
FAM19038-p1-1.1_001138 hypothetical protein 1303162 1303380 218 forward
FAM19038-p1-1.1_001139 DinB family protein 1303406 1303957 551 reverse
FAM19038-p1-1.1_001140 amino acid permease 1304141 1305637 1496 forward
FAM19038-p1-1.1_001141 glycoside hydrolase family 32 protein 1305663 1307198 1535 reverse
FAM19038-p1-1.1_001142 DUF222 domain-containing protein 1307322 1308695 1373 reverse
FAM19038-p1-1.1_001143 glycoside hydrolase family 65 protein 1308847 1311477 2630 reverse
FAM19038-p1-1.1_001144 calcium/sodium antiporter 1311531 1312505 974 forward
FAM19038-p1-1.1_001145 glutamate--cysteine ligase 1312562 1314040 1478 forward
FAM19038-p1-1.1_001146 radical SAM/SPASM domain-containing protein 1314078 1315328 1250 reverse
FAM19038-p1-1.1_001147 pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha 1315650 1316774 1124 forward
FAM19038-p1-1.1_001148 alpha-ketoacid dehydrogenase subunit beta 1316771 1317742 971 forward
FAM19038-p1-1.1_001149 2-oxo acid dehydrogenase subunit E2 1317756 1319165 1409 forward
FAM19038-p1-1.1_001150 DUF4282 domain-containing protein 1319194 1320072 878 reverse
FAM19038-p1-1.1_001151 alanine racemase GC:alr 1320143 1321285 1142 reverse
FAM19038-p1-1.1_001152 EcsC family protein 1321330 1322010 680 reverse
FAM19038-p1-1.1_001153 leucyl/phenylalanyl-tRNA--protein transferase 1322133 1322945 812 forward
FAM19038-p1-1.1_001154 prephenate dehydratase GC:pheA 1323670 1324623 953 forward
FAM19038-p1-1.1_001155 serine--tRNA ligase GC:serS 1324732 1326003 1271 forward
FAM19038-p1-1.1_001156 DUF4921 family protein 1326017 1327354 1337 forward
FAM19038-p1-1.1_001157 beta-glucosidase 1327338 1328744 1406 reverse
FAM19038-p1-1.1_001158 cellulase family glycosylhydrolase 1328741 1330672 1931 reverse
FAM19038-p1-1.1_001159 LacI family DNA-binding transcriptional regulator 1330692 1331537 845 reverse
FAM19038-p1-1.1_001160 HAD family phosphatase 1331534 1332328 794 reverse
FAM19038-p1-1.1_001161 transcription factor WhiB 1332385 1332882 497 reverse
FAM19038-p1-1.1_001162 argininosuccinate synthase GC:argG 1333252 1334670 1418 reverse
FAM19038-p1-1.1_001163 NAD(P)H-quinone oxidoreductase 1334837 1335838 1001 reverse
FAM19038-p1-1.1_001164 tRNA-Ser 1336033 1336115 82 forward
FAM19038-p1-1.1_001165 hypothetical protein 1336173 1336688 515 forward
FAM19038-p1-1.1_001166 hypothetical protein 1336818 1337081 263 reverse
FAM19038-p1-1.1_001167 sodium:solute symporter family protein 1337098 1338804 1706 reverse
FAM19038-p1-1.1_001168 galactokinase GC:galK 1339145 1340377 1232 forward
FAM19038-p1-1.1_001169 LacI family transcriptional regulator 1340390 1341466 1076 forward
FAM19038-p1-1.1_001170 LCP family protein 1341488 1343248 1760 reverse
FAM19038-p1-1.1_001171 tRNA-Ser 1343659 1343752 93 forward
FAM19038-p1-1.1_001172 tRNA-Arg 1343857 1343929 72 forward
FAM19038-p1-1.1_001173 hypothetical protein 1343981 1344283 302 reverse
FAM19038-p1-1.1_001174 glycerophosphodiester phosphodiesterase 1344528 1345250 722 forward
FAM19038-p1-1.1_001175 S9 family peptidase 1345288 1347324 2036 reverse
FAM19038-p1-1.1_001176 1-4-alpha-glucan branching protein 1347354 1349237 1883 reverse
FAM19038-p1-1.1_001177 hypothetical protein 1349344 1349865 521 forward
FAM19038-p1-1.1_001178 uracil phosphoribosyltransferase GC:upp 1349898 1350524 626 reverse
FAM19038-p1-1.1_001179 tRNA adenosine deaminase-associated protein 1350705 1351460 755 forward
FAM19038-p1-1.1_001180 nucleoside deaminase 1351522 1351989 467 forward
FAM19038-p1-1.1_001181 lipopolysaccharide biosynthesis protein 1352174 1353493 1319 forward
FAM19038-p1-1.1_001182 tRNA-Ser 1353571 1353658 87 forward
FAM19038-p1-1.1_001183 antitoxin HicB GC:pseudo-gene 1353823 1353996 173 forward
FAM19038-p1-1.1_001184 MarR family transcriptional regulator 1354080 1354991 911 forward
FAM19038-p1-1.1_001185 hypothetical protein 1355418 1355636 218 forward
FAM19038-p1-1.1_001186 hypothetical protein 1356054 1356305 251 forward
FAM19038-p1-1.1_001187 beta-lactamase family protein 1356333 1357853 1520 reverse
FAM19038-p1-1.1_001188 ABC transporter substrate-binding protein 1358072 1358989 917 reverse
FAM19038-p1-1.1_001189 ABC transporter permease 1359069 1359764 695 reverse
FAM19038-p1-1.1_001190 ABC transporter permease 1359761 1360411 650 reverse
FAM19038-p1-1.1_001191 ATP-binding cassette domain-containing protein 1360408 1361523 1115 reverse
FAM19038-p1-1.1_001192 potassium/proton antiporter 1361543 1363051 1508 forward
FAM19038-p1-1.1_001193 LytR C-terminal domain-containing protein 1363061 1363642 581 reverse
FAM19038-p1-1.1_001194 type II toxin-antitoxin system VapB family antitoxin 1363655 1363948 293 reverse
FAM19038-p1-1.1_001195 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme 1364137 1365303 1166 forward
FAM19038-p1-1.1_001196 hypothetical protein 1365489 1366655 1166 forward
FAM19038-p1-1.1_001197 septal ring lytic transglycosylase RlpA family protein 1366753 1367712 959 reverse
FAM19038-p1-1.1_001198 M20/M25/M40 family metallo-hydrolase 1367974 1369350 1376 reverse
FAM19038-p1-1.1_001199 LacI family transcriptional regulator 1369665 1370699 1034 forward
FAM19038-p1-1.1_001200 sugar ABC transporter ATP-binding protein 1370711 1372207 1496 forward