contig: FAM19038-p1-1.1_scf1 genome: FAM19038-p1-1.1
species: Acidipropionibacterium thoenii DSM 20276 taxid: 1122998

Metadata

Contig type Scaffold
Is Circular Yes
Is Plasmid No
GC-content 68.7 %
Length 2999408 bp
Gene count 2686

Genes on this contig

Gene ID Product Gene code Start ↑ End Length Strand
FAM19038-p1-1.1_002500 trehalose-phosphatase GC:otsB 2790152 2791075 923 reverse
FAM19038-p1-1.1_002501 trehalose-6-phosphate synthase 2791175 2792578 1403 forward
FAM19038-p1-1.1_002502 ABC-F family ATP-binding cassette domain-containing protein 2792648 2794297 1649 reverse
FAM19038-p1-1.1_002503 sigma-70 family RNA polymerase sigma factor 2794514 2795353 839 forward
FAM19038-p1-1.1_002504 hypothetical protein 2795371 2795919 548 forward
FAM19038-p1-1.1_002505 tRNA-Asn 2796006 2796081 75 forward
FAM19038-p1-1.1_002506 MFS transporter 2796231 2797433 1202 reverse
FAM19038-p1-1.1_002507 DNA primase 2797467 2799353 1886 reverse
FAM19038-p1-1.1_002508 HD domain-containing protein 2799389 2800507 1118 reverse
FAM19038-p1-1.1_002509 hypothetical protein 2800593 2801159 566 forward
FAM19038-p1-1.1_002510 tRNA dihydrouridine synthase DusB GC:dusB 2801163 2802311 1148 reverse
FAM19038-p1-1.1_002511 succinate dehydrogenase/fumarate reductase iron-sulfur subunit 2802343 2803098 755 reverse
FAM19038-p1-1.1_002512 fumarate reductase/succinate dehydrogenase flavoprotein subunit 2803095 2805059 1964 reverse
FAM19038-p1-1.1_002513 succinate dehydrogenase cytochrome b subunit 2805056 2805832 776 reverse
FAM19038-p1-1.1_002514 glutamate decarboxylase GC:pseudo-gene 2805930 2807397 1467 reverse
FAM19038-p1-1.1_002515 NUDIX hydrolase 2807437 2808171 734 reverse
FAM19038-p1-1.1_002516 quinolinate synthase NadA GC:nadA 2808288 2809349 1061 forward
FAM19038-p1-1.1_002517 L-aspartate oxidase GC:nadB 2809346 2811094 1748 forward
FAM19038-p1-1.1_002518 carboxylating nicotinate-nucleotide diphosphorylase 2811091 2812122 1031 forward
FAM19038-p1-1.1_002519 glycine--tRNA ligase 2812257 2813648 1391 reverse
FAM19038-p1-1.1_002520 transcriptional repressor 2813827 2814243 416 forward
FAM19038-p1-1.1_002521 ISL3 family transposase 2814389 2815720 1331 reverse
FAM19038-p1-1.1_002522 hypothetical protein 2815819 2816154 335 reverse
FAM19038-p1-1.1_002523 ACR3 family arsenite efflux transporter GC:arsB GC:pseudo-gene 2816296 2817388 1092 reverse
FAM19038-p1-1.1_002524 FAD-dependent oxidoreductase 2817677 2819071 1394 reverse
FAM19038-p1-1.1_002525 helix-turn-helix transcriptional regulator 2819099 2819446 347 reverse
FAM19038-p1-1.1_002526 arsenite efflux transporter metallochaperone ArsD GC:arsD 2819559 2819981 422 forward
FAM19038-p1-1.1_002527 arsenical pump-driving ATPase GC:arsA 2820010 2821770 1760 forward
FAM19038-p1-1.1_002528 ATP-binding protein 2821844 2822653 809 reverse
FAM19038-p1-1.1_002529 IS21 family transposase 2822650 2824311 1661 reverse
FAM19038-p1-1.1_002530 pyridoxamine 5'-phosphate oxidase family protein 2824719 2825204 485 reverse
FAM19038-p1-1.1_002531 2-3-diaminopropionate biosynthesis protein SbnA GC:sbnA 2825503 2826690 1187 forward
FAM19038-p1-1.1_002532 amino acid decarboxylase 2826779 2828764 1985 forward
FAM19038-p1-1.1_002533 Y4yA family PLP-dependent enzyme 2828776 2830485 1709 forward
FAM19038-p1-1.1_002534 IS481-like element ISPfr15 family transposase 2830845 2831849 1004 forward
FAM19038-p1-1.1_002535 DDE-type integrase/transposase/recombinase GC:pseudo-gene 2832044 2832676 632 forward
FAM19038-p1-1.1_002536 AAA family ATPase 2832798 2833616 818 reverse
FAM19038-p1-1.1_002537 DDE-type integrase/transposase/recombinase 2833613 2835010 1397 reverse
FAM19038-p1-1.1_002538 recombinase family protein 2835018 2835614 596 reverse
FAM19038-p1-1.1_002539 winged helix-turn-helix transcriptional regulator 2835808 2836167 359 forward
FAM19038-p1-1.1_002540 cadmium transporter 2836164 2836766 602 forward
FAM19038-p1-1.1_002541 recombinase family protein 2836881 2837438 557 forward
FAM19038-p1-1.1_002542 hypothetical protein 2837511 2838329 818 reverse
FAM19038-p1-1.1_002543 DEAD/DEAH box helicase 2838406 2842680 4274 reverse
FAM19038-p1-1.1_002544 ISL3 family transposase 2842629 2843954 1325 reverse
FAM19038-p1-1.1_002545 hypothetical protein 2844061 2844450 389 reverse
FAM19038-p1-1.1_002546 ribbon-helix-helix protein- CopG family 2844545 2844739 194 forward
FAM19038-p1-1.1_002547 DNA repair protein RecO GC:recO 2845146 2845892 746 reverse
FAM19038-p1-1.1_002548 S8 family serine peptidase 2846013 2848787 2774 forward
FAM19038-p1-1.1_002549 cation:proton antiporter 2848815 2850029 1214 forward
FAM19038-p1-1.1_002550 isoprenyl transferase 2850043 2850864 821 forward
FAM19038-p1-1.1_002551 class II glutamine amidotransferase 2850893 2851708 815 reverse
FAM19038-p1-1.1_002552 2-isopropylmalate synthase GC:leuA 2851854 2853617 1763 reverse
FAM19038-p1-1.1_002553 amidohydrolase family protein 2853807 2855306 1499 forward
FAM19038-p1-1.1_002554 GTPase Era 2855407 2856390 983 reverse
FAM19038-p1-1.1_002555 HlyC/CorC family transporter 2856530 2857828 1298 reverse
FAM19038-p1-1.1_002556 rRNA maturation RNase YbeY GC:ybeY 2857825 2858292 467 reverse
FAM19038-p1-1.1_002557 PhoH family protein 2858292 2859263 971 reverse
FAM19038-p1-1.1_002558 aminoglycoside phosphotransferase family protein 2859433 2860548 1115 forward
FAM19038-p1-1.1_002559 methyltransferase domain-containing protein 2860586 2861191 605 reverse
FAM19038-p1-1.1_002560 MFS transporter 2861400 2862749 1349 forward
FAM19038-p1-1.1_002561 helix-turn-helix transcriptional regulator 2862746 2863399 653 forward
FAM19038-p1-1.1_002562 prolyl aminopeptidase GC:pip 2863318 2864331 1013 reverse
FAM19038-p1-1.1_002563 queuosine precursor transporter 2864367 2865089 722 forward
FAM19038-p1-1.1_002564 ABC transporter permease 2865094 2866317 1223 reverse
FAM19038-p1-1.1_002565 ABC transporter ATP-binding protein 2866314 2867231 917 reverse
FAM19038-p1-1.1_002566 response regulator transcription factor 2867284 2867979 695 reverse
FAM19038-p1-1.1_002567 sensor histidine kinase 2867976 2869397 1421 reverse
FAM19038-p1-1.1_002568 tRNA guanosine(34) transglycosylase Tgt GC:tgt 2869416 2870732 1316 reverse
FAM19038-p1-1.1_002569 EamA family transporter 2870769 2871626 857 forward
FAM19038-p1-1.1_002570 UDP-N-acetylglucosamine pyrophosphorylase 2871659 2872861 1202 forward
FAM19038-p1-1.1_002571 RecQ family ATP-dependent DNA helicase 2872928 2875063 2135 forward
FAM19038-p1-1.1_002572 DoxX family membrane protein 2875209 2875613 404 forward
FAM19038-p1-1.1_002573 16S rRNA (uracil(1498)-N(3))-methyltransferase 2875632 2876360 728 reverse
FAM19038-p1-1.1_002574 molecular chaperone DnaJ GC:dnaJ 2876357 2877544 1187 reverse
FAM19038-p1-1.1_002575 heat-inducible transcriptional repressor HrcA GC:hrcA 2877554 2878573 1019 reverse
FAM19038-p1-1.1_002576 MBL fold metallo-hydrolase 2878688 2879485 797 forward
FAM19038-p1-1.1_002577 hypothetical protein 2879489 2879794 305 reverse
FAM19038-p1-1.1_002578 hypothetical protein 2879965 2881200 1235 reverse
FAM19038-p1-1.1_002579 inositol monophosphatase family protein 2881279 2882088 809 reverse
FAM19038-p1-1.1_002580 DUF3097 domain-containing protein 2882085 2882942 857 reverse
FAM19038-p1-1.1_002581 coproporphyrinogen III oxidase 2883013 2884212 1199 reverse
FAM19038-p1-1.1_002582 extracellular solute-binding protein 2884237 2885532 1295 forward
FAM19038-p1-1.1_002583 sugar ABC transporter permease 2885535 2886494 959 forward
FAM19038-p1-1.1_002584 carbohydrate ABC transporter permease 2886491 2887351 860 forward
FAM19038-p1-1.1_002585 dihydrofolate reductase 2887402 2887974 572 reverse
FAM19038-p1-1.1_002586 TetR/AcrR family transcriptional regulator 2888106 2888756 650 forward
FAM19038-p1-1.1_002587 ABC transporter ATP-binding protein 2888753 2889658 905 forward
FAM19038-p1-1.1_002588 hypothetical protein 2889655 2891262 1607 forward
FAM19038-p1-1.1_002589 acetate--CoA ligase GC:acs 2891270 2893162 1892 reverse
FAM19038-p1-1.1_002590 rhomboid family intramembrane serine protease 2893392 2893946 554 forward
FAM19038-p1-1.1_002591 1-4-dihydroxy-2-naphthoyl-CoA synthase 2893943 2894932 989 forward
FAM19038-p1-1.1_002592 hypothetical protein 2894979 2895281 302 reverse
FAM19038-p1-1.1_002593 AMP-binding protein 2895313 2896518 1205 forward
FAM19038-p1-1.1_002594 isochorismate synthase 2896421 2897767 1346 forward
FAM19038-p1-1.1_002595 ABC-F family ATP-binding cassette domain-containing protein 2897822 2899453 1631 reverse
FAM19038-p1-1.1_002596 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase GC:menD 2899616 2901307 1691 reverse
FAM19038-p1-1.1_002597 o-succinylbenzoate synthase 2901300 2902304 1004 reverse
FAM19038-p1-1.1_002598 elongation factor 4 GC:lepA 2902331 2904184 1853 reverse
FAM19038-p1-1.1_002599 30S ribosomal protein S20 GC:rpsT 2904341 2904607 266 forward