contig: FAM19038-p1-1.1_scf1 genome: FAM19038-p1-1.1
species: Acidipropionibacterium thoenii DSM 20276 taxid: 1122998

Metadata

Contig type Scaffold
Is Circular Yes
Is Plasmid No
GC-content 68.7 %
Length 2999408 bp
Gene count 2686

Genes on this contig

Gene ID Product Gene code Start ↑ End Length Strand
FAM19038-p1-1.1_000001 class F sortase 206 661 455 forward
FAM19038-p1-1.1_000002 FAD-binding oxidoreductase GC:pseudo-gene 778 3093 2315 forward
FAM19038-p1-1.1_000003 (Fe-S)-binding protein 2985 3638 653 forward
FAM19038-p1-1.1_000004 LysE family translocator 3859 4488 629 reverse
FAM19038-p1-1.1_000005 DNA polymerase I GC:polA 4532 7213 2681 reverse
FAM19038-p1-1.1_000006 precorrin-6A synthase (deacetylating) GC:cobF 7254 8012 758 reverse
FAM19038-p1-1.1_000007 PaaI family thioesterase 8140 8574 434 forward
FAM19038-p1-1.1_000008 response regulator 8732 9409 677 reverse
FAM19038-p1-1.1_000009 tRNA-Leu 9575 9657 82 forward
FAM19038-p1-1.1_000010 pyruvate kinase GC:pyk 9795 11222 1427 reverse
FAM19038-p1-1.1_000011 RluA family pseudouridine synthase 11405 12346 941 reverse
FAM19038-p1-1.1_000012 signal peptidase II 12343 12795 452 reverse
FAM19038-p1-1.1_000013 TraR/DksA family transcriptional regulator 12930 13364 434 reverse
FAM19038-p1-1.1_000014 DivIVA domain-containing protein 13526 14635 1109 reverse
FAM19038-p1-1.1_000015 YggT family protein 14837 15127 290 reverse
FAM19038-p1-1.1_000016 cell division protein SepF GC:sepF 15157 15693 536 reverse
FAM19038-p1-1.1_000017 laccase domain-containing protein 15810 16589 779 reverse
FAM19038-p1-1.1_000018 cell division protein FtsZ GC:ftsZ 16598 17770 1172 reverse
FAM19038-p1-1.1_000019 FtsQ-type POTRA domain-containing protein 17946 18665 719 reverse
FAM19038-p1-1.1_000020 UDP-N-acetylmuramate--L-alanine ligase 18662 20083 1421 reverse
FAM19038-p1-1.1_000021 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase GC:murG 20070 21224 1154 reverse
FAM19038-p1-1.1_000022 putative lipid II flippase FtsW GC:ftsW 21301 22476 1175 reverse
FAM19038-p1-1.1_000023 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase 22584 24083 1499 reverse
FAM19038-p1-1.1_000024 phospho-N-acetylmuramoyl-pentapeptide- transferase 24065 25129 1064 reverse
FAM19038-p1-1.1_000025 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase 25126 26562 1436 reverse
FAM19038-p1-1.1_000026 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2- 6-diaminopimelate ligase 26559 28196 1637 reverse
FAM19038-p1-1.1_000027 penicillin-binding protein 2 28280 30154 1874 reverse
FAM19038-p1-1.1_000028 cell division protein FtsL 30151 30603 452 reverse
FAM19038-p1-1.1_000029 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH GC:rsmH 30600 31616 1016 reverse
FAM19038-p1-1.1_000030 division/cell wall cluster transcriptional repressor MraZ GC:mraZ 31762 32199 437 reverse
FAM19038-p1-1.1_000031 AAA domain-containing protein 32299 33408 1109 forward
FAM19038-p1-1.1_000032 DUF58 domain-containing protein 33479 34672 1193 forward
FAM19038-p1-1.1_000033 transglutaminase domain-containing protein 34669 36993 2324 forward
FAM19038-p1-1.1_000034 excalibur calcium-binding domain-containing protein 37016 37321 305 reverse
FAM19038-p1-1.1_000035 DUF3040 domain-containing protein GC:pseudo-gene 37721 37819 98 reverse
FAM19038-p1-1.1_000036 glycine cleavage system aminomethyltransferase GcvT GC:gcvT 38148 39260 1112 forward
FAM19038-p1-1.1_000037 glycine cleavage system protein GcvH GC:gcvH 39339 39713 374 forward
FAM19038-p1-1.1_000038 aminomethyl-transferring glycine dehydrogenase GC:gcvP 39803 42763 2960 forward
FAM19038-p1-1.1_000039 EamA family transporter RarD GC:rarD 42760 43713 953 reverse
FAM19038-p1-1.1_000040 ATP-binding cassette domain-containing protein 43811 44740 929 forward
FAM19038-p1-1.1_000041 ABC transporter permease 44745 45605 860 forward
FAM19038-p1-1.1_000042 ABC transporter permease 45509 46444 935 forward
FAM19038-p1-1.1_000043 gluconokinase 46547 47083 536 forward
FAM19038-p1-1.1_000044 Hsp20/alpha crystallin family protein 47091 47528 437 reverse
FAM19038-p1-1.1_000045 alpha/beta hydrolase 47658 48341 683 reverse
FAM19038-p1-1.1_000046 ABC transporter ATP-binding protein 48392 49216 824 reverse
FAM19038-p1-1.1_000047 ABC transporter permease subunit 49210 50337 1127 reverse
FAM19038-p1-1.1_000048 ABC transporter substrate-binding protein 50343 51542 1199 reverse
FAM19038-p1-1.1_000049 carotenoid dehydrogenase 51956 53257 1301 forward
FAM19038-p1-1.1_000050 AAA family ATPase 53353 55611 2258 forward
FAM19038-p1-1.1_000051 5-10-methylenetetrahydrofolate reductase 55538 56461 923 reverse
FAM19038-p1-1.1_000052 Dyp-type peroxidase 56519 57490 971 reverse
FAM19038-p1-1.1_000053 polyprenyl synthetase family protein 57619 58719 1100 forward
FAM19038-p1-1.1_000054 hypothetical protein 58941 59372 431 forward
FAM19038-p1-1.1_000055 protein kinase 59541 61130 1589 forward
FAM19038-p1-1.1_000056 DMT family transporter 61287 62213 926 forward
FAM19038-p1-1.1_000057 MBL fold metallo-hydrolase 62264 62911 647 reverse
FAM19038-p1-1.1_000058 3-deoxy-7-phosphoheptulonate synthase class II 62997 64391 1394 reverse
FAM19038-p1-1.1_000059 response regulator transcription factor 64452 65174 722 reverse
FAM19038-p1-1.1_000060 hypothetical protein 65282 66490 1208 reverse
FAM19038-p1-1.1_000061 hypothetical protein 66480 67304 824 reverse
FAM19038-p1-1.1_000062 1-acyl-sn-glycerol-3-phosphate acyltransferase 67301 68071 770 reverse
FAM19038-p1-1.1_000063 hypothetical protein 68198 68704 506 forward
FAM19038-p1-1.1_000064 ROK family glucokinase 68694 69779 1085 reverse
FAM19038-p1-1.1_000065 peptidoglycan endopeptidase 69784 70935 1151 reverse
FAM19038-p1-1.1_000066 DEDD exonuclease domain-containing protein 71158 72939 1781 forward
FAM19038-p1-1.1_000067 Lrp/AsnC family transcriptional regulator 72950 73225 275 forward
FAM19038-p1-1.1_000068 rhomboid family intramembrane serine protease 73244 73822 578 reverse
FAM19038-p1-1.1_000069 peptidylprolyl isomerase 73986 74501 515 reverse
FAM19038-p1-1.1_000070 hypothetical protein 74664 75635 971 forward
FAM19038-p1-1.1_000071 transcriptional regulator 75848 76402 554 forward
FAM19038-p1-1.1_000072 leader peptidase (prepilin peptidase)/N-methyltransferase 76404 77129 725 forward
FAM19038-p1-1.1_000073 anthranilate phosphoribosyltransferase GC:trpD 77188 78261 1073 reverse
FAM19038-p1-1.1_000074 response regulator transcription factor 78275 78682 407 reverse
FAM19038-p1-1.1_000075 heme-copper oxidase subunit III 79055 79648 593 forward
FAM19038-p1-1.1_000076 c-type cytochrome 79678 80481 803 forward
FAM19038-p1-1.1_000077 Rieske (2Fe-2S) protein 80493 81563 1070 forward
FAM19038-p1-1.1_000078 ubiquinol-cytochrome c reductase cytochrome b subunit 81563 83287 1724 forward
FAM19038-p1-1.1_000079 hypothetical protein 83218 83712 494 reverse
FAM19038-p1-1.1_000080 GuaB1 family IMP dehydrogenase-related protein 83802 85262 1460 forward
FAM19038-p1-1.1_000081 NAD(P)H-binding protein 85300 85995 695 forward
FAM19038-p1-1.1_000082 cytochrome c oxidase subunit 4 86096 86491 395 reverse
FAM19038-p1-1.1_000083 cytochrome c oxidase subunit I GC:ctaD 86488 88125 1637 reverse
FAM19038-p1-1.1_000084 cytochrome c oxidase subunit II GC:coxB 88221 89024 803 reverse
FAM19038-p1-1.1_000085 iron-sulfur cluster insertion protein ErpA GC:erpA 89302 89658 356 reverse
FAM19038-p1-1.1_000086 hypothetical protein 89811 90755 944 reverse
FAM19038-p1-1.1_000087 hypothetical protein 90752 91042 290 reverse
FAM19038-p1-1.1_000088 PspA/IM30 family protein 91039 91797 758 reverse
FAM19038-p1-1.1_000089 DUF3043 domain-containing protein 92070 92762 692 forward
FAM19038-p1-1.1_000090 hypothetical protein 92793 93011 218 forward
FAM19038-p1-1.1_000091 hypothetical protein 93072 93437 365 reverse
FAM19038-p1-1.1_000092 2-oxoglutarate dehydrogenase- E2 component- dihydrolipoamide succinyltransferase GC:sucB 93509 95305 1796 forward
FAM19038-p1-1.1_000093 lipoyl(octanoyl) transferase LipB GC:lipB 95402 96217 815 forward
FAM19038-p1-1.1_000094 cytochrome c oxidase assembly protein 96346 98346 2000 forward
FAM19038-p1-1.1_000095 heavy metal translocating P-type ATPase 98343 100556 2213 forward
FAM19038-p1-1.1_000096 lipoyl synthase GC:lipA 100760 101752 992 forward
FAM19038-p1-1.1_000097 DUF4191 domain-containing protein 101869 102636 767 forward
FAM19038-p1-1.1_000098 ABC-F family ATP-binding cassette domain-containing protein 102643 104454 1811 forward
FAM19038-p1-1.1_000099 DedA family protein GC:pseudo-gene 104676 105272 596 reverse
FAM19038-p1-1.1_000100 glycosyltransferase family 4 protein 105394 106527 1133 reverse