locus tag: FAM19471-i1-1.1_000999 genome: FAM19471-i1-1.1
species: Limosilactobacillus fermentum taxid: 1613

Annotations

Type Name Description Pathways
Gene Product
 SPFH/Band 7/PHB domain protein
Ortholog
 N0.HOG0001693 SPFH/Band 7/PHB domain protein
Gene Ontology
 GO:0071944 cell periphery
Gene Ontology
 GO:0044464 obsolete cell part
Gene Ontology
 GO:0030312 external encapsulating structure
Gene Ontology
 GO:0016020 membrane
Gene Ontology
 GO:0005886 plasma membrane
Gene Ontology
 GO:0005623 obsolete cell
Gene Ontology
 GO:0005618 cell wall
Gene Ontology
 GO:0005576 extracellular region
Gene Ontology
 GO:0005575 cellular_component
Eggnog Protein
 EP:qmcA
Eggnog Ortholog
 EO:1TPXU
Eggnog Description
 ED:prohibitin homologues

Sequences

Nucleotide sequence (GC-content: 56.7 %):

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ATGTTCGGAATTGCCATCGTCAAGCAAAACACCCAAGGGCTGATTGAAACCTTAGGGAAGTACTCCCGGACTGTCGAAGCCGGTTTACACCTGTACATTCCCCTGGTTCAACACGTCCGCCACGTTAGCTTGGCCATGCAGCCCATCTTATTGCAAAAGTACAGCGTCATCACCAGCGATAACGCCGACGTACAGGCCTCGGTTTCGTTAAACTACCACGTCACCGACGCCGTTAAGTACAGCTACGAAAACACCAACTCCGAGGAGTCGATGATCCAACTGGTCCGCGGCCACCTGCGCGACATCATCGGCCGGCTGGAATTAAGCCAGGCCCTCGGTTCGACTTCCAACATCAACGCCCAGCTGGCCGCTGCGATCGGCGATTTAACCGGCCTGTACGGAATTAACGTTGACCGGGTCAACATTGATGAACTGACCCCGTCACCGGAGATCCAAAAGGCGATGGACAAGCAGCTGACCGCCGACCGGGAACGGGTAGCCACGATCGCCCGGGCCGAAGGGGAAGCCCGCAACATCAAGCTGACCACCGACGCTAAAAACGCCGCCCTGGTCGAAACCGCCCAGGCCCAAGCCACGGCGACGCGGACCAAGGCCGACGCCGAAGCCTACCGGATTGAAAAGATTCGCCAGGCCCTGAGTAGCGTTGACGACAAGTACTTCCGCGACCAAAGCCTACTGGCCTTCTCTAAGCTGGCGGAGGGCAACAACAATTTAGTGGTGATGGATAAAGACGACATCACCGAACTAGGTAAGGTCCCGGTCGCTAAGGAATTGTGGGACGCCGGCAAAAACAAATAA

Protein sequence:

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MFGIAIVKQNTQGLIETLGKYSRTVEAGLHLYIPLVQHVRHVSLAMQPILLQKYSVITSDNADVQASVSLNYHVTDAVKYSYENTNSEESMIQLVRGHLRDIIGRLELSQALGSTSNINAQLAAAIGDLTGLYGINVDRVNIDELTPSPEIQKAMDKQLTADRERVATIARAEGEARNIKLTTDAKNAALVETAQAQATATRTKADAEAYRIEKIRQALSSVDDKYFRDQSLLAFSKLAEGNNNLVVMDKDDITELGKVPVAKELWDAGKNK

GenBank Info

locus_tag - FAM19471-i1-1.1_000999
inference - COORDINATES: similar to AA sequence:RefSeq:WP_003685435.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - SPFH/Band 7/PHB domain protein
protein_id - extdb:FAM19471-i1-1.1_000999

Gene locus (click to toggle display options) expand

Located on scaffold FAM19471-i1-1_scf0016

Update range to 10000 bp

Cellular location expand

Responsible annotations:
SL-0041: GO:0005618 cell wall
SL-0162: GO:0016020 membrane
SL-0243: GO:0005576 extracellular region
SL-0039: GO:0005886 plasma membrane
FAM19471-i1-1.1_000998
FAM19471-i1-1.1_001000