contig:
FAM19471-i1-1.1_scf16
genome:
FAM19471-i1-1.1
species:
Limosilactobacillus fermentum
taxid:
1613
Metadata
| Contig type |
Scaffold |
| Is Circular |
No |
| Is Plasmid |
No |
| GC-content |
52.4 % |
| Length |
37201 bp |
| Gene count |
34 |
Genes on this contig
| Gene ID |
Product |
Gene code |
Start ↑ |
End |
Length |
Strand |
|
FAM19471-i1-1.1_000975
|
NAD(P)H-binding protein |
|
140 |
994 |
854 |
reverse
|
|
FAM19471-i1-1.1_000976
|
histidine phosphatase family protein |
|
1396 |
2049 |
653 |
reverse
|
|
FAM19471-i1-1.1_000977
|
LTA synthase family protein |
|
2273 |
4402 |
2129 |
forward
|
|
FAM19471-i1-1.1_000978
|
hypothetical protein |
|
4797 |
5273 |
476 |
forward
|
|
FAM19471-i1-1.1_000979
|
Crp/Fnr family transcriptional regulator |
|
5374 |
6021 |
647 |
reverse
|
|
FAM19471-i1-1.1_000980
|
DNA-binding protein |
|
5999 |
6547 |
548 |
reverse
|
|
FAM19471-i1-1.1_000981
|
copper-binding protein |
|
6547 |
6777 |
230 |
reverse
|
|
FAM19471-i1-1.1_000982
|
heavy metal translocating P-type ATPase |
GC:pseudo-gene |
6839 |
8692 |
1853 |
reverse
|
|
FAM19471-i1-1.1_000983
|
NAD(P)/FAD-dependent oxidoreductase |
|
8886 |
9878 |
992 |
reverse
|
|
FAM19471-i1-1.1_000984
|
nucleoside hydrolase |
|
10051 |
11010 |
959 |
forward
|
|
FAM19471-i1-1.1_000985
|
ABC transporter permease |
|
11547 |
12116 |
569 |
forward
|
|
FAM19471-i1-1.1_000986
|
ABC transporter ATP-binding protein |
|
12120 |
13502 |
1382 |
forward
|
|
FAM19471-i1-1.1_000987
|
energy-coupling factor transporter transmembrane protein EcfT |
|
13492 |
14145 |
653 |
forward
|
|
FAM19471-i1-1.1_000988
|
DUF4870 domain-containing protein |
|
14190 |
14549 |
359 |
forward
|
|
FAM19471-i1-1.1_000989
|
sodium:proton antiporter |
|
14640 |
16601 |
1961 |
forward
|
|
FAM19471-i1-1.1_000990
|
lipoate--protein ligase |
|
17238 |
18251 |
1013 |
reverse
|
|
FAM19471-i1-1.1_000991
|
organic hydroperoxide resistance protein |
|
18263 |
18685 |
422 |
reverse
|
|
FAM19471-i1-1.1_000992
|
alpha/beta hydrolase |
|
19059 |
20021 |
962 |
reverse
|
|
FAM19471-i1-1.1_000993
|
helix-turn-helix transcriptional regulator |
|
20151 |
20576 |
425 |
forward
|
|
FAM19471-i1-1.1_000994
|
SAM-dependent methyltransferase |
|
20573 |
21424 |
851 |
forward
|
|
FAM19471-i1-1.1_000995
|
hypothetical protein |
|
21795 |
22271 |
476 |
reverse
|
|
FAM19471-i1-1.1_000996
|
hypothetical protein |
|
22278 |
22676 |
398 |
reverse
|
|
FAM19471-i1-1.1_000997
|
universal stress protein |
|
22775 |
23245 |
470 |
forward
|
|
FAM19471-i1-1.1_000998
|
ANTAR domain-containing protein |
|
23272 |
23622 |
350 |
forward
|
|
FAM19471-i1-1.1_000999
|
SPFH/Band 7/PHB domain protein |
|
23802 |
24620 |
818 |
forward
|
|
FAM19471-i1-1.1_001000
|
MFS transporter |
|
24835 |
26196 |
1361 |
reverse
|
|
FAM19471-i1-1.1_001001
|
transketolase |
GC:tkt |
26407 |
28410 |
2003 |
reverse
|
|
FAM19471-i1-1.1_001002
|
transaldolase |
|
28423 |
29169 |
746 |
reverse
|
|
FAM19471-i1-1.1_001003
|
ribose-5-phosphate isomerase RpiA |
GC:rpiA |
29561 |
30241 |
680 |
reverse
|
|
FAM19471-i1-1.1_001004
|
transketolase |
GC:tkt |
30528 |
32504 |
1976 |
reverse
|
|
FAM19471-i1-1.1_001005
|
PTS ascorbate transporter subunit IIC |
|
32657 |
34012 |
1355 |
reverse
|
|
FAM19471-i1-1.1_001006
|
PTS sugar transporter subunit IIB |
|
34038 |
34334 |
296 |
reverse
|
|
FAM19471-i1-1.1_001007
|
PTS sugar transporter subunit IIA |
|
34353 |
34796 |
443 |
reverse
|
|
FAM19471-i1-1.1_001008
|
BglG family transcription antiterminator |
|
34928 |
36991 |
2063 |
forward
|