locus tag: FAM19471-i1-1.1_000983 genome: FAM19471-i1-1.1
species: Limosilactobacillus fermentum taxid: 1613

Annotations

Type Name Description Pathways
KEGG reaction
 R09372 methaneselenol:NADP+ oxidoreductase; 2 NADPH + 2 H+ + Methylselenic acid <=> 2 NADP+ + 2 H2O + Methaneselenol kornec00450
KEGG reaction
 R03596 hydrogen selenide:NADP+ oxidoreductase; Hydrogen selenide + 3 NADP+ + 3 H2O <=> Selenite + 3 NADPH + 5 H+ kornec00450
KEGG reaction
 R02016 NADPH:oxidized-thioredoxin oxidoreductase; Thioredoxin + NADP+ <=> Thioredoxin disulfide + NADPH + H+
Gene Product
 NAD(P)/FAD-dependent oxidoreductase
Ortholog
 N0.HOG0001089 NAD(P)/FAD-dependent oxidoreductase
KEGG gene
 K21567 fnr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
KEGG gene
 K00384 trxB, TRR; thioredoxin reductase (NADPH) [EC:1.8.1.9] kornec00450
Gene Ontology
 GO:0071281 cellular response to iron ion
Gene Ontology
 GO:0071248 cellular response to metal ion
Gene Ontology
 GO:0071241 cellular response to inorganic substance
Gene Ontology
 GO:0070887 cellular response to chemical stimulus
Gene Ontology
 GO:0051716 cellular response to stimulus
Gene Ontology
 GO:0050896 response to stimulus
Gene Ontology
 GO:0042221 response to chemical
Gene Ontology
 GO:0010039 response to iron ion
Gene Ontology
 GO:0010038 response to metal ion
Gene Ontology
 GO:0010035 response to inorganic substance
Gene Ontology
 GO:0009987 cellular process
Gene Ontology
 GO:0008150 biological_process
Eggnog Protein
 EP:yumC
Eggnog Ortholog
 EO:1TRPN
Eggnog Description
 ED:Ferredoxin--NADP reductase
EC Number
 EC:1.8.1.9 thioredoxin-disulfide reductase; NADP-thioredoxin reductase; NADPH-thioredoxin reductase; thioredoxin reductase (NADPH); NADPH2:oxidized thioredoxin oxidoreductase kornec00450
EC Number
 EC:1.19.1.1 flavodoxin---NADP+ reductase; FPR
EC Number
 EC:1.18.1.2 ferredoxin---NADP+ reductase; ferredoxin-nicotinamide adenine dinucleotide phosphate reductase; ferredoxin-NADP+ reductase; TPNH-ferredoxin reductase; ferredoxin-NADP+ oxidoreductase; NADP+:ferredoxin oxidoreductase; ferredoxin-TPN reductase; ferredoxin-NADP+-oxidoreductase; NADPH:ferredoxin oxidoreductase; ferredoxin-nicotinamide-adenine dinucleotide phosphate (oxidized) reductase kornec01100 kornec00195

Occurs in the following pathway maps:

Pathway Description
kornec00195 Photosynthesis
kornec00450 Selenocompound metabolism
kornec01100 Metabolic pathways

Sequences

Nucleotide sequence (GC-content: 57.5 %):

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ATGGAAGAACGCTATGACGTGACGATTATTGGTGGGGGTCCGGCCGGGATGTTCGCCGCCTTTTACTGCGGCCTACACCAGCTAAAGGCCCAACTAATCGAAGCACTGCCCCAACTGGGGGGCCAACCCGCCGCCCTCTACCCGGAAAAGCGGGTTTGGGACGTGGCCGGTAAGGCTGGGGTCACTGGCCAGGAACTGGCGGATGACCTAGCAGCCCAAATCGAAGTGGCGCCGGTCGATCAATTCCTGGGCGAAAAGGTCACCGACGTGGTCAAAGAAGATGACGGCTCCTTCACCATTCACAGCGCCAAGCGGACGTCGACCTCCAAGTCGATTGTAATTGCGATGGGTAACGGCGCCTTTAGTCCCCGCAAGCTGGCCCTGCCCGGCGCCGAAGAACTGGAGGGCAAACAGGTACGCTACTTTGCCAACCACAAGGAAGACTTTAAGGACCAACGAGTTGCCGTCCTCGGTGGTGGGGACGCCGCCATCGACATGGCCTTGATGCTAGAAGACGTGGCTGAGCAAGTTTACCTGGTTCACCGCCGCGATGCTTTCCGGGCCCTTGAACACACCGTTGCCCAACTGGAGGCCTCAACGATTGAAAAGTTGACCCCGTACCTGCCCAAGGACTTAACCGTCAACGCCGATCAATCGGTCACCTTGAACCTCAAGAAGATGCGCGCTGACGAAGAGCGACCACTCGAAGTTGATAAGGTCTTGGTAAACTACGGCTTCACCTCCAATAACGCCGCTTTAAAGGACTGGTCTTTGGACCTAGCGAGCGAACGGGGGCAAATCAAGGTCGACCAAACGATGAAGACCTCAGTTCCTGGGGTGTACGCAATCGGCGACGGGGTCGTTTACGAAGGTAAGGTGGCCCTGATTGCGACCGGCTTCGGGGAGGCGCCTACGGCAATCACCAACCTAGCCAAGGAACTCTACCCCGACAAACGGATGGCTACTCACAGTTCATCGATGGGGATTGGCTAA

Protein sequence:

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MEERYDVTIIGGGPAGMFAAFYCGLHQLKAQLIEALPQLGGQPAALYPEKRVWDVAGKAGVTGQELADDLAAQIEVAPVDQFLGEKVTDVVKEDDGSFTIHSAKRTSTSKSIVIAMGNGAFSPRKLALPGAEELEGKQVRYFANHKEDFKDQRVAVLGGGDAAIDMALMLEDVAEQVYLVHRRDAFRALEHTVAQLEASTIEKLTPYLPKDLTVNADQSVTLNLKKMRADEERPLEVDKVLVNYGFTSNNAALKDWSLDLASERGQIKVDQTMKTSVPGVYAIGDGVVYEGKVALIATGFGEAPTAITNLAKELYPDKRMATHSSSMGIG

GenBank Info

locus_tag - FAM19471-i1-1.1_000983
inference - COORDINATES: similar to AA sequence:RefSeq:WP_003681199.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - NAD(P)/FAD-dependent oxidoreductase
protein_id - extdb:FAM19471-i1-1.1_000983

Gene locus (click to toggle display options) expand

Located on scaffold FAM19471-i1-1_scf0016

Update range to 10000 bp
FAM19471-i1-1.1_000982
FAM19471-i1-1.1_000984