locus tag: FAM19038-p1-1.1_002684 genome: FAM19038-p1-1.1
species: Acidipropionibacterium thoenii DSM 20276 taxid: 1122998

Annotations

Type Name Description Pathways
Gene Code
 uvrB
Gene Product
 excinuclease ABC subunit UvrB
Ortholog
 N0.HOG0000970 excinuclease ABC subunit UvrB
KEGG gene
 K08999 K08999; uncharacterized protein
KEGG gene
 K03702 uvrB; excinuclease ABC subunit B kornec03420
Gene Ontology
 GO:0044464 obsolete cell part
Gene Ontology
 GO:0044424 obsolete intracellular part
Gene Ontology
 GO:0005737 cytoplasm
Gene Ontology
 GO:0005623 obsolete cell
Gene Ontology
 GO:0005622 intracellular anatomical structure
Gene Ontology
 GO:0005575 cellular_component
Eggnog Protein
 EP:uvrB
Eggnog Ortholog
 EO:2GJ03
Eggnog Description
 ED:damaged site

Occurs in the following pathway maps:

Pathway Description
kornec03420 Nucleotide excision repair

Sequences

Nucleotide sequence (GC-content: 66.7 %):

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ATGCGCCCCGTCTCAGAGATCACCCGCCGGGTGGCACCCTTCCATGTCGTCAGCGACTTCCAGCCCTCGGGCGACCAGCCGAAGGCCATCGACGAGCTCGAGAAGAGGCTGAAGGCCGGGGAGCAGAACGTCGTGCTGCTCGGCGCCACCGGCACCGGCAAGACGGCCACCGTCGCCTGGTTGGCCGAGCGGGTGCAGCGCCCGATGCTGGTGATGCAGCCCAACAAGACGCTGGCCGCCCAGTTCGCCCAGGAGCTGAGGACCTTCTTCCCCGACAACGCCGTCGAGTACTTCGTGTCCTACTACGACTACTACCAGCCCGAGGCCTACATCCCGCAGAGCGACACCTACATCGAGAAGGACTCCAGCCTCAACGAGGAGGTGGAGAGGCTGCGGCACTCGGCCACCAACTCGCTGCTCACCCGGCGCGACGTCATCGTGGTGGCGACCGTCTCGGCGATCTACGGCCTGGGCACCCCGCAGGAGTACGTGGACCGGATGGTCACCCTGAGGGTCGGTGACGAGTGGGACCGCGACAAGCTGCTGCGCCAGCTGGTCACCGAGCAGTACGTCCGCAACGACCTGGCGGGGGAGCGGGGCACCTTCCGGGTCCACGGCGACACCCTGGAGATCTTCCCGATGTACGAGGAGAACGCGCTGCGGGTGGAGTTCTTCGGCGACGAGATCGAGGCCCTCACCACCCTGCGCCCGCTCACCGGCGAGGTGGTCAGCGAGGACCAGGAGGTCTACGTCTTCCCGGCCACCCACTACGTGGCTGGCCCCGAGCGGATGGAGCGGGCGATCACCGGGATCGAGAAGGAGCTGGCCGACCGGCTGGCCGTGCTGGAGCGCGACGGCAAACTGCTGGAGGCCCAGCGGCTGAAGATGCGCACGAACTACGACATCGAGATGATGCGCCAGGTGGGCAGCTGCGCGGGGATCGAGAACTACTCGCGTCACATCGACGGACGCGAGCCCGGGTCGGCGCCGAACTGCCTGCTCGACTACTTCCCGGAGGACTTCCTGCTGGTGGTCGACGAGTCCCATGTCACCATCCCCCAGATCGGCGGGATGTACGAGGGGGACATGAGCCGCAAGCGCACCCTCGTGGAGCACGGCTTCCGGCTGCCCAGCGCGATGGACAACCGGCCGCTCAAGTTCGACGAGTTCGTCAGCAGGATCGGTCAGACGGTCTATCTGTCGGCCACCCCCGGCCCCTACGAGACCGAGCGGGCCGACGGAGTCGTCGAGCAGATCATCCGCCCCACCGGGCTGGTCGACCCGCAGATCATCGTGAAGTCCACCAAGGGCCAGATCGACGACCTGATGGGCGAGATCCGGATCCGCGTCGAGAAGCAGGAGCGGGTGCTGGTGACCACCCTCACCAAGAAGATGGCCGAGGACCTCACCGACTACCTCATGGAGCACGGCATCCGGACCCGGTACCTGCACTCGGAGATCGACACCCTCAAACGGATCGAACTGCTCAAGCAGCTGCGGATGGGGGAGTTCGACGTGCTGGTCGGCATCAACCTGCTGAGGGAGGGGCTGGACCTTCCCGAGGTCTCCCTGGTCGCCATCCTGGACGCCGACAAGGAGGGCTTCCTGCGCTCGGAGAGGTCCCTCATCCAGACCATCGGTCGAGCCGCCCGCAATGTCAACGGGCAGGTCCACATGTACGCCGACGAGATCACCGACTCGATGCAGGTGGCGATCGACGAGACGAACCGTCGACGCGAGATCCAGATCGCCTACAACACCGAGCACGGCATCGACCCGCAGCCGTTGCGCAAGAAGATCGGCGACATCACCGAGATGCTCGCCCGGGAGGACGCCGACACCGACTCGCTGGTGGCCTCAGTGGCGGGCGGTCGCAAGGGGGCCGATGCCGCCGGGATGGAGGGTCGACGCAATCTGGACACCTCGACGATGGCCGCCTCCCAGCTCGGCGATCTCATCGTTGAGCTGAGCGCCGAGATGCGCCAGGCCGCCGCGGAGCTGAAGTTCGAGGTGGCGGCCCGGCTGCGCGACGAGATCGCCGACCTCAAGCAGGAACTGCGTCAGATGGTCGAGGCCGCCAAGTAG

Protein sequence:

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MRPVSEITRRVAPFHVVSDFQPSGDQPKAIDELEKRLKAGEQNVVLLGATGTGKTATVAWLAERVQRPMLVMQPNKTLAAQFAQELRTFFPDNAVEYFVSYYDYYQPEAYIPQSDTYIEKDSSLNEEVERLRHSATNSLLTRRDVIVVATVSAIYGLGTPQEYVDRMVTLRVGDEWDRDKLLRQLVTEQYVRNDLAGERGTFRVHGDTLEIFPMYEENALRVEFFGDEIEALTTLRPLTGEVVSEDQEVYVFPATHYVAGPERMERAITGIEKELADRLAVLERDGKLLEAQRLKMRTNYDIEMMRQVGSCAGIENYSRHIDGREPGSAPNCLLDYFPEDFLLVVDESHVTIPQIGGMYEGDMSRKRTLVEHGFRLPSAMDNRPLKFDEFVSRIGQTVYLSATPGPYETERADGVVEQIIRPTGLVDPQIIVKSTKGQIDDLMGEIRIRVEKQERVLVTTLTKKMAEDLTDYLMEHGIRTRYLHSEIDTLKRIELLKQLRMGEFDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSERSLIQTIGRAARNVNGQVHMYADEITDSMQVAIDETNRRREIQIAYNTEHGIDPQPLRKKIGDITEMLAREDADTDSLVASVAGGRKGADAAGMEGRRNLDTSTMAASQLGDLIVELSAEMRQAAAELKFEVAARLRDEIADLKQELRQMVEAAK

GenBank Info

gene - uvrB
locus_tag - FAM19038-p1-1.1_002684
inference - COORDINATES: similar to AA sequence:RefSeq:WP_015582967.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - excinuclease ABC subunit UvrB
protein_id - extdb:FAM19038-p1-1.1_002684

Gene locus (click to toggle display options) expand

Located on scaffold FAM19038-p1-1_scf0001

Update range to 10000 bp

Cellular location expand

Responsible annotations:
SL-0229: GO:0005622 intracellular anatomical structure
SL-0086: GO:0005737 cytoplasm
FAM19038-p1-1.1_002683
FAM19038-p1-1.1_002685