Annotations

Type Name Description Pathways
Gene Product
TIR domain-containing protein
Ortholog
N0.HOG0005880 TIR domain-containing protein
Eggnog Ortholog
EO:1MXWM
Eggnog Description
ED:TIR domain

Sequences

Nucleotide sequence (GC-content: 57.8 %):

ATGAGTACGGCGAGCGAACTCAAGCGCTATCGAGAGCAAGCTGTAAGTCTCCGCAAGGACATCAGCGGACACTCCAAGACCGTCGCTGACAAGCGGAAGAAGGCTGCGGATGCTCAGTCAGCGGCCTCACGTAGTCGATCGGACGCGACTATTCGTTCGAAGCTGCGCGAGGCGGAGACTGCGACCAATGCAGCAAACACTGCCGAGCGCAAGCGAGCGGACGCTGAGAAGAAGCTCGCCGACGTCGAGAAGAAGGTGGCCGACCTTCAAACCCGATACGAGAAGGAACAGCGTACCGAATCAGAGCGGTCTCTGAACGCAATTCGCAAAGCGTCGGCCACGGCAAGCTCTCAATTCGGGTCATTCTCTCGCGCGCAAGCTCCGGTCGTATGGCAACCAAGGGTCAGCCCGGAACTCACAGATATTTTCCTTTCACACGCCAGCGAAGACAAGGACGAGATTGCTCGACCACTGCGTGAGGCTCTGGAAGACCGCGGGCTCACCGTCTGGTTCGATGAACTCAAGATCAAAGTTGGCCACAGCATCCGACAGGAGATTGAGAAGGGTATTGAGGGTGCTAGGTTCGGCGTAGTGATACTCTCCCCGAGCTTCTTCGCGAAGCAATGGACACAGGCAGAGTTGGACGCCCTCTTCACGAAGAAGATTGATAGCAGTCGCAGCATGATCCTCCCAGTGTGGCACCGTGTGACCAAGGACGAGGTGGCCGCTCACTCGCCGCTACTCGCAGGACTCCTTGCCCTCAACTCGGCGACGATGACGGTCTCGGAAATTGCTGGAGTCATCGCAGAAGCCGTCGCAGAGGACACTCAGTAG

Protein sequence:

MSTASELKRYREQAVSLRKDISGHSKTVADKRKKAADAQSAASRSRSDATIRSKLREAETATNAANTAERKRADAEKKLADVEKKVADLQTRYEKEQRTESERSLNAIRKASATASSQFGSFSRAQAPVVWQPRVSPELTDIFLSHASEDKDEIARPLREALEDRGLTVWFDELKIKVGHSIRQEIEKGIEGARFGVVILSPSFFAKQWTQAELDALFTKKIDSSRSMILPVWHRVTKDEVAAHSPLLAGLLALNSATMTVSEIAGVIAEAVAEDTQ

GenBank Info

locus_tag - FAM19038-p1-1.1_002644
inference - COORDINATES: protein motif:HMM:NF025056.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - TIR domain-containing protein
protein_id - extdb:FAM19038-p1-1.1_002644

Gene locus (click to toggle display options) expand

Located on scaffold FAM19038-p1-1_scf0001

Update range to 10000 bp

FAM19038-p1-1.1_002643
FAM19038-p1-1.1_002645