contig: FAM19038-p1-1.1_scf1 genome: FAM19038-p1-1.1
species: Acidipropionibacterium thoenii DSM 20276 taxid: 1122998

Metadata

Contig type Scaffold
Is Circular Yes
Is Plasmid No
GC-content 68.7 %
Length 2999408 bp
Gene count 2686

Genes on this contig

Gene ID Product Gene code Start ↑ End Length Strand
FAM19038-p1-1.1_000501 alcohol dehydrogenase catalytic domain-containing protein 544317 545423 1106 forward
FAM19038-p1-1.1_000502 NAD-dependent malic enzyme 545580 547301 1721 forward
FAM19038-p1-1.1_000503 Gfo/Idh/MocA family oxidoreductase 547373 548392 1019 forward
FAM19038-p1-1.1_000504 sugar phosphate isomerase/epimerase 548490 549332 842 reverse
FAM19038-p1-1.1_000505 sugar porter family MFS transporter 549411 551078 1667 reverse
FAM19038-p1-1.1_000506 TIM barrel protein 551894 552769 875 forward
FAM19038-p1-1.1_000507 Gfo/Idh/MocA family oxidoreductase 552822 553841 1019 forward
FAM19038-p1-1.1_000508 5-deoxy-glucuronate isomerase GC:iolB 553879 554763 884 forward
FAM19038-p1-1.1_000509 IclR family transcriptional regulator 554851 555669 818 forward
FAM19038-p1-1.1_000510 IclR family transcriptional regulator 555687 556427 740 forward
FAM19038-p1-1.1_000511 PH domain-containing protein 556542 557030 488 forward
FAM19038-p1-1.1_000512 PH domain-containing protein 557102 558607 1505 forward
FAM19038-p1-1.1_000513 ROK family protein 558619 559449 830 forward
FAM19038-p1-1.1_000514 arginine--tRNA ligase GC:argS 559633 561303 1670 reverse
FAM19038-p1-1.1_000515 aldo/keto reductase 561610 562422 812 forward
FAM19038-p1-1.1_000516 MFS transporter 562557 563900 1343 reverse
FAM19038-p1-1.1_000517 DUF218 domain-containing protein 564350 565015 665 reverse
FAM19038-p1-1.1_000518 hypothetical protein 565398 566126 728 forward
FAM19038-p1-1.1_000519 hypothetical protein 566090 566935 845 forward
FAM19038-p1-1.1_000520 ABC transporter permease 566928 567881 953 forward
FAM19038-p1-1.1_000521 ABC transporter permease subunit 567878 568762 884 forward
FAM19038-p1-1.1_000522 ABC transporter ATP-binding protein 568755 569579 824 forward
FAM19038-p1-1.1_000523 ABC transporter ATP-binding protein 569576 570403 827 forward
FAM19038-p1-1.1_000524 glucose-6-phosphate isomerase GC:pgi 570496 572178 1682 reverse
FAM19038-p1-1.1_000525 carboxypeptidase regulatory-like domain-containing protein 572586 573227 641 forward
FAM19038-p1-1.1_000526 aldolase 573253 573909 656 reverse
FAM19038-p1-1.1_000527 DUF3516 domain-containing protein 574142 576736 2594 forward
FAM19038-p1-1.1_000528 YbhB/YbcL family Raf kinase inhibitor-like protein 576924 577385 461 forward
FAM19038-p1-1.1_000529 cutinase family protein 577450 578817 1367 forward
FAM19038-p1-1.1_000530 hypothetical protein 578807 579559 752 reverse
FAM19038-p1-1.1_000531 tRNA-Leu 579769 579851 82 forward
FAM19038-p1-1.1_000532 aldo/keto reductase 580012 580872 860 forward
FAM19038-p1-1.1_000533 CrcB family protein 580925 581284 359 reverse
FAM19038-p1-1.1_000534 CrcB family protein 581281 581853 572 reverse
FAM19038-p1-1.1_000535 universal stress protein 581850 582410 560 reverse
FAM19038-p1-1.1_000536 LysR family transcriptional regulator 583162 584040 878 reverse
FAM19038-p1-1.1_000537 MFS transporter 584061 585401 1340 forward
FAM19038-p1-1.1_000538 TerC family protein 585534 586556 1022 forward
FAM19038-p1-1.1_000539 polysaccharide deacetylase family protein 586584 588209 1625 forward
FAM19038-p1-1.1_000540 murein biosynthesis integral membrane protein MurJ GC:murJ 588548 590608 2060 reverse
FAM19038-p1-1.1_000541 aspartate kinase 590908 592182 1274 reverse
FAM19038-p1-1.1_000542 DUF1707 domain-containing protein 592307 592741 434 forward
FAM19038-p1-1.1_000543 isoleucine--tRNA ligase 592869 596252 3383 reverse
FAM19038-p1-1.1_000544 HAD family phosphatase 596547 597389 842 reverse
FAM19038-p1-1.1_000545 HAD family hydrolase 597389 598195 806 reverse
FAM19038-p1-1.1_000546 threonine/serine exporter family protein 598411 599994 1583 forward
FAM19038-p1-1.1_000547 MFS transporter 600078 601427 1349 forward
FAM19038-p1-1.1_000548 thiamine-binding protein 601533 601850 317 reverse
FAM19038-p1-1.1_000549 recombination protein RecR GC:recR 601945 602568 623 reverse
FAM19038-p1-1.1_000550 YbaB/EbfC family nucleoid-associated protein 602762 603091 329 reverse
FAM19038-p1-1.1_000551 DNA polymerase III subunit gamma and tau GC:pseudo-gene 604690 606345 1655 reverse
FAM19038-p1-1.1_000552 hypothetical protein 606462 606824 362 reverse
FAM19038-p1-1.1_000553 signal recognition particle sRNA small type GC:ffs 606884 606980 96 reverse
FAM19038-p1-1.1_000554 RNA-binding S4 domain-containing protein 607128 607490 362 forward
FAM19038-p1-1.1_000555 tRNA-Ser 607610 607697 87 forward
FAM19038-p1-1.1_000556 hypothetical protein 608027 608599 572 forward
FAM19038-p1-1.1_000557 hypothetical protein 608918 609919 1001 reverse
FAM19038-p1-1.1_000558 MHS family MFS transporter 610307 611755 1448 reverse
FAM19038-p1-1.1_000559 malto-oligosyltrehalose synthase GC:treY 611842 614391 2549 forward
FAM19038-p1-1.1_000560 IS630 family transposase GC:pseudo-gene 614718 615751 1033 forward
FAM19038-p1-1.1_000561 acyltransferase 616131 617165 1034 forward
FAM19038-p1-1.1_000562 malto-oligosyltrehalose trehalohydrolase GC:treZ 617313 619115 1802 forward
FAM19038-p1-1.1_000563 VanZ family protein 619174 619659 485 forward
FAM19038-p1-1.1_000564 VanZ family protein 619745 620389 644 forward
FAM19038-p1-1.1_000565 low molecular weight phosphatase family protein 620450 621028 578 reverse
FAM19038-p1-1.1_000566 hypothetical protein 621117 621743 626 reverse
FAM19038-p1-1.1_000567 polysaccharide biosynthesis tyrosine autokinase 621944 623617 1673 forward
FAM19038-p1-1.1_000568 sugar transferase 623775 625271 1496 forward
FAM19038-p1-1.1_000569 transposase GC:pseudo-gene 625425 625814 389 reverse
FAM19038-p1-1.1_000570 IS1634 family transposase 625829 627472 1643 reverse
FAM19038-p1-1.1_000571 glycosyltransferase family 4 protein 628481 629566 1085 forward
FAM19038-p1-1.1_000572 polysaccharide pyruvyl transferase family protein 629649 630764 1115 forward
FAM19038-p1-1.1_000573 coenzyme F420 hydrogenase 630772 632196 1424 reverse
FAM19038-p1-1.1_000574 lipopolysaccharide biosynthesis protein 632193 633665 1472 reverse
FAM19038-p1-1.1_000575 hypothetical protein 635054 635251 197 forward
FAM19038-p1-1.1_000576 IS3 family transposase 635248 636279 1031 forward
FAM19038-p1-1.1_000577 IS630 family transposase GC:pseudo-gene 636455 637571 1116 forward
FAM19038-p1-1.1_000578 glycosyltransferase family 2 protein 638136 638987 851 forward
FAM19038-p1-1.1_000579 glycosyltransferase 639461 640153 692 forward
FAM19038-p1-1.1_000580 hypothetical protein 640263 641561 1298 forward
FAM19038-p1-1.1_000581 IS630 family transposase 642030 643145 1115 forward
FAM19038-p1-1.1_000582 IS3 family transposase GC:pseudo-gene 643224 644019 795 reverse
FAM19038-p1-1.1_000583 IS3 family transposase 643952 644842 890 reverse
FAM19038-p1-1.1_000584 transposase 644833 645120 287 reverse
FAM19038-p1-1.1_000585 IS3-like element ISPfr11 family transposase GC:pseudo-gene 645188 645717 529 reverse
FAM19038-p1-1.1_000586 IS256 family transposase 645864 647123 1259 reverse
FAM19038-p1-1.1_000587 IS630 family transposase GC:pseudo-gene 647861 648977 1116 reverse
FAM19038-p1-1.1_000588 serine O-acetyltransferase 649348 649845 497 forward
FAM19038-p1-1.1_000589 IS630 family transposase 649899 651014 1115 forward
FAM19038-p1-1.1_000590 ISL3 family transposase 651244 652575 1331 reverse
FAM19038-p1-1.1_000591 IS3 family transposase GC:pseudo-gene 652698 653740 1042 reverse
FAM19038-p1-1.1_000592 LytR family transcriptional regulator 654092 655195 1103 forward
FAM19038-p1-1.1_000593 transposase family protein 655302 655646 344 reverse
FAM19038-p1-1.1_000594 ISL3 family transposase 655549 656856 1307 reverse
FAM19038-p1-1.1_000595 hypothetical protein 657022 657651 629 reverse
FAM19038-p1-1.1_000596 PadR family transcriptional regulator 657648 657986 338 reverse
FAM19038-p1-1.1_000597 transposase 658239 658463 224 forward
FAM19038-p1-1.1_000598 transposase 658606 658866 260 forward
FAM19038-p1-1.1_000599 glutathione S-transferase GC:pseudo-gene 658872 659219 347 forward
FAM19038-p1-1.1_000600 glutathione S-transferase 659216 660289 1073 forward