locus tag: FAM19471-i1-1.1_001147 genome: FAM19471-i1-1.1
species: Limosilactobacillus fermentum taxid: 1613

Annotations

Type Name Description Pathways
Gene Product
 transposase
Ortholog
 N0.HOG0004278 transposase, partial
Eggnog Protein
 EP:isp2
Eggnog Ortholog
 EO:1TQ93
Eggnog Description
 ED:PFAM transposase

Sequences

Nucleotide sequence (GC-content: 42.4 %):

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ATGACTGATTATATTAAAAATATCCTTCAAATTAAAGACCCTAATCTTCATTTCACAGACGTTGTCTTTGAAAATAATGACGGACGGGAGACGCAGGTCTTCATTGGGACGGTCTCGCTTAAATTGGATCGGTGCCCACATTGCGGCTTTGCGGATACCTTCATTAAGAATGGCCATTCTTACCAAACCATTAAGTACCTCTCAATTAACGAAAGTTGTCCCACTATGTTGCGGATCGGTAAGCAACGCCTGAGATGTAAGAATTGCCAAGATTCGTTCATGGCAAAGACCAACGTCGTTGATAAATACTGTTCCATTGCCAAAGCAGTTAAACACAAGGCACTTACGATGCTTGAAAGTAATGTCTCTCAAAAGGACGTGTCTAAGTTTACCGGTGTGTCACCTAGTACCATTGGCCGACTCCTAGACAGTGATCAAGCGCTCCTTCGCTTTAATAGTCGCACTTTACCCACTAATATTGCCATTGATGAGTTCCGTGGTCCGCAGGGGAAGTATTGCTTCATTATCGTTGATAATGATACCTCACAAATCTACCAAATTCTC

Protein sequence:

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MTDYIKNILQIKDPNLHFTDVVFENNDGRETQVFIGTVSLKLDRCPHCGFADTFIKNGHSYQTIKYLSINESCPTMLRIGKQRLRCKNCQDSFMAKTNVVDKYCSIAKAVKHKALTMLESNVSQKDVSKFTGVSPSTIGRLLDSDQALLRFNSRTLPTNIAIDEFRGPQGKYCFIIVDNDTSQIYQIL

GenBank Info

locus_tag - FAM19471-i1-1.1_001147
inference - COORDINATES: similar to AA sequence:RefSeq:WP_015639477.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - transposase
protein_id - extdb:FAM19471-i1-1.1_001147

Gene locus (click to toggle display options) expand

Located on scaffold FAM19471-i1-1_scf0020

Update range to 10000 bp
FAM19471-i1-1.1_001146
FAM19471-i1-1.1_001148