Annotations

Type Name Description Pathways
Gene Code
tnpB
Ortholog
N0.HOG0000377 IS200/IS605 family element transposase accessory protein TnpB, partial
KEGG gene
K07496 K07496; putative transposase
Gene Product
IS200/IS605 family element transposase accessory protein TnpB
Eggnog Ortholog
EO:1TRNY
Eggnog Description
ED:transposase

Sequences

Nucleotide sequence (GC-content: 39.0 %):

ATGGTTCTTAAAGCCGTGAAAATGCGTATATATCCTAATTCCGAGCAACGTGACCGTTTAATGCAAACCTTCGGTTGCGCTCGTTTTGTGTGGAATCAGATGCTTAATATGCAAATTGAGCGGCGAAAGAACAATCCAGACGCCAAGTTTGTCAATGCCTTTGGCATGAACAATCTTCTAAAACGATTAAAAGAAGAATATCCCTGGTTGAAGCAAGCAGAATCAACATCCTTGCAAAGCACTAATCGCAATCTAGCCGACGCCTTTCAGCGTTTTTTTAAAGGGCAAAATAAATTTCCACACTTTAAGTCACGAAAGTATGCACAGAGCTATAACTCGAAATGTGTTAACCACAACATTAAAGTGATTGATAATCACCATATTAAGTTGCCTAAATTAGGGGTAGTTTACTTTCGATCAGGACGTTTACCACAAGGCAAAATCAAGAACGTTACTGTTCGCCTAACTGTTGCTAATCAATACTACATTACCGTTTTAACTGAATGCGAAAACCAAACATTAGCTAAGACTGGTAAGCGCGTTGGTGGTGATTTAGGATTAAAATCATTACTTAATCTATCCGACGGTTACAAAGAGCCAATTCACCATTTTGAAGATAAGTATCGTAAGAAGCTACACCATTGGGAAAAGTTGCGCAGTCGACGCTACTTATTAGCTAAACAAGCCATTGCTTGGGATTATCACAATAAGGTCTTAGCTCCACGGCAATTAGACGACTTCAAAAATTACCAAAAAGCTCGTGTCATGGTTGCTAAATATCGTCAAAAAATCGCCAACCAACGGTTGGATCAGTTACAAAAGTTCACAACCAAGTTAGTTAAACAATATGGCATCATTGTGCTAGAGAAACTTAAGATTAAGGGTATGTTGAAAAATCATAAACTAGCTCGAGCGATTACCAACGCTAGTTGGTCTAAGCTAGTTAGTATCTTGCAGTATAAATGTGATTGGTACGGTAAAAAACTCATTCAGGTTAATCCAGCATATACTAGTCAAATCTGTATTAACTGTGGGAAAAACAACCATCGGTTAGGTTTAGATAAATCGGAATGGCTAGACGTTCGTGAATGGGATTGTCCCAACTGCGGGACCCGCCTAGATCGCGATATCAATGCAGCTCAAGTAATTCTGAAAAAGGGGTTAGCTACCCAATAA

Protein sequence:

MVLKAVKMRIYPNSEQRDRLMQTFGCARFVWNQMLNMQIERRKNNPDAKFVNAFGMNNLLKRLKEEYPWLKQAESTSLQSTNRNLADAFQRFFKGQNKFPHFKSRKYAQSYNSKCVNHNIKVIDNHHIKLPKLGVVYFRSGRLPQGKIKNVTVRLTVANQYYITVLTECENQTLAKTGKRVGGDLGLKSLLNLSDGYKEPIHHFEDKYRKKLHHWEKLRSRRYLLAKQAIAWDYHNKVLAPRQLDDFKNYQKARVMVAKYRQKIANQRLDQLQKFTTKLVKQYGIIVLEKLKIKGMLKNHKLARAITNASWSKLVSILQYKCDWYGKKLIQVNPAYTSQICINCGKNNHRLGLDKSEWLDVREWDCPNCGTRLDRDINAAQVILKKGLATQ

GenBank Info

gene - tnpB
locus_tag - FAM19471-i1-1.1_001094
inference - COORDINATES: similar to AA sequence:RefSeq:WP_012390817.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - IS200/IS605 family element transposase accessory protein TnpB
protein_id - extdb:FAM19471-i1-1.1_001094

Gene locus (click to toggle display options) expand

Located on scaffold FAM19471-i1-1_scf0019

Update range to 10000 bp

FAM19471-i1-1.1_001093
FAM19471-i1-1.1_001095