locus tag: FAM19471-i1-1.1_001093 genome: FAM19471-i1-1.1
species: Limosilactobacillus fermentum taxid: 1613

Annotations

Type Name Description Pathways
Ortholog
 N0.HOG0001269 ATP-binding cassette domain-containing protein
KEGG gene
 K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
Gene Ontology
 GO:0050896 response to stimulus
Gene Ontology
 GO:0009628 response to abiotic stimulus
Gene Ontology
 GO:0009409 response to cold
Gene Ontology
 GO:0009266 response to temperature stimulus
Gene Ontology
 GO:0008150 biological_process
Gene Ontology
 GO:0006950 response to stress
Eggnog Protein
 EP:ybiT
Eggnog Ortholog
 EO:1TPW0
Eggnog Description
 ED:ABC transporter
Gene Product
 ATP-binding cassette domain-containing protein

Sequences

Nucleotide sequence (GC-content: 54.1 %):

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GTGATTACCATTACTGACCTGAGCCTGAACCTGTCAGGCCGGACCTTGTACCGCGACGTTAACCTCAAGTTCACGCCTGGTAACTGCTACGGGGTGATTGGGGCGAACGGGGCCGGCAAGTCCACCTTCTTAAAGCTGTTGGAAGGGAAGATGAGCCCGACGACCGGGACGATTTCGATTGGCCCTAACGAACGGATGACCTCCTTAAACCAGGACCACTTCGCCTTTGACGACTGCACGGTCATGGACACCGTGATTCAGGGCCACGCCAAGCTGTACCAAATCATGCAAGAAAAAGACGCCCTCTACGCCAAGCCGGACTTCTCCGATGAAGACGGGGTGAAGGTGGCCGAACTGGAAGCCGAATTTGCCGAAATGGACGGCTGGAACGCCGAAGCCAACGCCTCCCAACTCCTCCAATCACTGGGGATTCCGGAAAGCCTACACGACACCTTGATGGGTGAACTGGCCGAAAGCGACAAGGTGAAGGTCCTCTTGGCCCAAGCCCTGTTCGACTCGCCAGACATCCTTTTGCTAGACGAACCGACCAACGGGCTGGACGTTCACACGATCGCCTGGCTGGAAGACTTCCTGGCCGGCTACGATAAGATCGTGATCGTCGTCTCCCACGACCGTCACTTCTTAAACCAAGTCTGCACCCAGATGTGTGACGTAGACTTCCAAAAGATCAAGCTCTACGTGGGGAACTACGACTTCTGGTACGAATCTAGCCAACTGGCTGCCCAATTAGCCGCCAACCAAAACGCTAAGAAGGAAGAAAAGATCAAGGAGCTCCAAGAGTTCATCGCCCGCTTCTCGGCCAACGCCTCCAAGCACAAGCAGGCCACTTCCCGTAAGAAGCAGTTGGAAAAGATCACCTTAGAAGACATCCAACCGTCAATGCGTAAGTACCCCTACATCAAGTTTGAACAGGACCGCCCGCTGGGAAACGACCTATTAAAGGTGGAACACATTTCCCACACCGTTGACGGCGAAAAGTTGTTAAACGACGTCTCCTTCTTGATCCGGCCGGGCGAAAAGGTGGCCTTCTTGTCCCGCAACGACATGGCGACGACCGTCTTGATGCAAATTATTGCCGGGGAAATAACGCCGGACGAAGGGACCGTTACCTGGGGCCAAACGACCTCTACTAACTACATGTCCCGTGACTTAAACGCCGCCTTTGATAACGATGAATTGACGATCATTGACTGGTTGCGCCAATTCGCCACCAAAGAGGAAAACGACAATACCTTCCTGCGCGGCTTCTTAGGGAAGATGCTGTTCTCCGGGGAAGAAATTGACAAGCAAATCAAGGTCCTTTCCGGGGGCGAAAAGGTGCGGTGCCTCTTATCCAAGATGATGTTGCAACACGCCAACGTCTTATTGATGGACGACCCGACCAACCACCTCGACCTGGAATCGATCACGGCGCTAAACGACGCCATGGAAAGCTTCCCAGGCTCGATCCTCTTCACCAGCCACGACCACGAATTCATTCAAACGATTGCTGACCACCTGATTGAAGTGGGACCAAACGGCTTTGTGAGCCGCGCCGACACCACTTACGATGACTTTTTGGCCCACCCGACGGCCCAAGAACAAGTGGCCGCCCTGTACGAATAA

Protein sequence:

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MITITDLSLNLSGRTLYRDVNLKFTPGNCYGVIGANGAGKSTFLKLLEGKMSPTTGTISIGPNERMTSLNQDHFAFDDCTVMDTVIQGHAKLYQIMQEKDALYAKPDFSDEDGVKVAELEAEFAEMDGWNAEANASQLLQSLGIPESLHDTLMGELAESDKVKVLLAQALFDSPDILLLDEPTNGLDVHTIAWLEDFLAGYDKIVIVVSHDRHFLNQVCTQMCDVDFQKIKLYVGNYDFWYESSQLAAQLAANQNAKKEEKIKELQEFIARFSANASKHKQATSRKKQLEKITLEDIQPSMRKYPYIKFEQDRPLGNDLLKVEHISHTVDGEKLLNDVSFLIRPGEKVAFLSRNDMATTVLMQIIAGEITPDEGTVTWGQTTSTNYMSRDLNAAFDNDELTIIDWLRQFATKEENDNTFLRGFLGKMLFSGEEIDKQIKVLSGGEKVRCLLSKMMLQHANVLLMDDPTNHLDLESITALNDAMESFPGSILFTSHDHEFIQTIADHLIEVGPNGFVSRADTTYDDFLAHPTAQEQVAALYE

GenBank Info

locus_tag - FAM19471-i1-1.1_001093
inference - COORDINATES: similar to AA sequence:RefSeq:WP_015639340.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - ATP-binding cassette domain-containing protein
protein_id - extdb:FAM19471-i1-1.1_001093

Gene locus (click to toggle display options) expand

Located on scaffold FAM19471-i1-1_scf0019

Update range to 10000 bp
FAM19471-i1-1.1_001092
FAM19471-i1-1.1_001094