locus tag: FAM19038-p1-1.1_002676 genome: FAM19038-p1-1.1
species: Acidipropionibacterium thoenii DSM 20276 taxid: 1122998

Annotations

Type Name Description Pathways
Gene Code
 uvrC
Gene Product
 excinuclease ABC subunit UvrC
Ortholog
 N0.HOG0001059 excinuclease ABC subunit UvrC
KEGG gene
 K03703 uvrC; excinuclease ABC subunit C kornec03420
Gene Ontology
 GO:1990391 DNA repair complex
Gene Ontology
 GO:1905348 endonuclease complex
Gene Ontology
 GO:1905347 endodeoxyribonuclease complex
Gene Ontology
 GO:1902494 catalytic complex
Gene Ontology
 GO:1901360 organic cyclic compound metabolic process
Gene Ontology
 GO:0140097 catalytic activity, acting on DNA
Gene Ontology
 GO:0090305 nucleic acid phosphodiester bond hydrolysis
Gene Ontology
 GO:0090304 nucleic acid metabolic process
Gene Ontology
 GO:0071944 cell periphery
Gene Ontology
 GO:0071704 organic substance metabolic process
Gene Ontology
 GO:0071496 cellular response to external stimulus
Gene Ontology
 GO:0051716 cellular response to stimulus
Gene Ontology
 GO:0050896 response to stimulus
Gene Ontology
 GO:0046483 heterocycle metabolic process
Gene Ontology
 GO:0044464 obsolete cell part
Gene Ontology
 GO:0044424 obsolete intracellular part
Gene Ontology
 GO:0044260 cellular macromolecule metabolic process
Gene Ontology
 GO:0044238 primary metabolic process
Gene Ontology
 GO:0044237 cellular metabolic process
Gene Ontology
 GO:0043170 macromolecule metabolic process
Gene Ontology
 GO:0040007 growth
Gene Ontology
 GO:0034641 cellular nitrogen compound metabolic process
Gene Ontology
 GO:0033554 cellular response to stress
Gene Ontology
 GO:0032991 protein-containing complex
Gene Ontology
 GO:0031668 cellular response to extracellular stimulus
Gene Ontology
 GO:0030312 external encapsulating structure
Gene Ontology
 GO:0016788 hydrolase activity, acting on ester bonds
Gene Ontology
 GO:0016787 hydrolase activity
Gene Ontology
 GO:0016020 membrane
Gene Ontology
 GO:0009991 response to extracellular stimulus
Gene Ontology
 GO:0009987 cellular process
Gene Ontology
 GO:0009628 response to abiotic stimulus
Gene Ontology
 GO:0009605 response to external stimulus
Gene Ontology
 GO:0009432 SOS response
Gene Ontology
 GO:0009381 excinuclease ABC activity
Gene Ontology
 GO:0009380 excinuclease repair complex
Gene Ontology
 GO:0009314 response to radiation
Gene Ontology
 GO:0008152 metabolic process
Gene Ontology
 GO:0008150 biological_process
Gene Ontology
 GO:0007154 cell communication
Gene Ontology
 GO:0006974 cellular response to DNA damage stimulus
Gene Ontology
 GO:0006950 response to stress
Gene Ontology
 GO:0006807 nitrogen compound metabolic process
Gene Ontology
 GO:0006725 cellular aromatic compound metabolic process
Gene Ontology
 GO:0006281 DNA repair
Gene Ontology
 GO:0006259 DNA metabolic process
Gene Ontology
 GO:0006139 nucleobase-containing compound metabolic process
Gene Ontology
 GO:0005886 plasma membrane
Gene Ontology
 GO:0005737 cytoplasm
Gene Ontology
 GO:0005623 obsolete cell
Gene Ontology
 GO:0005622 intracellular anatomical structure
Gene Ontology
 GO:0005618 cell wall
Gene Ontology
 GO:0005575 cellular_component
Gene Ontology
 GO:0004536 deoxyribonuclease activity
Gene Ontology
 GO:0004520 endodeoxyribonuclease activity
Gene Ontology
 GO:0004519 endonuclease activity
Gene Ontology
 GO:0004518 nuclease activity
Gene Ontology
 GO:0003824 catalytic activity
Gene Ontology
 GO:0003674 molecular_function
Eggnog Protein
 EP:uvrC
Eggnog Ortholog
 EO:2GIS4
Eggnog Description
 ED:The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision

Occurs in the following pathway maps:

Pathway Description
kornec03420 Nucleotide excision repair

Sequences

Nucleotide sequence (GC-content: 70.5 %):

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ATGGCCGATCCGTCCAGCTACCGCCCTGCCCCCGGCACCATCCCCACCGACCCCGGGGTGTACCGGTTCAGCGACGAGCACGGCCAGGTGATCTACGTCGGCAAGGCGAAGAACCTGCGCAACCGGCTCAACTCCTACTTTCAGGACATCTCGGCCCTGCACCCGCGCACCCAGCGGATGGTGACCACCGCCGCCCACGTCCAGTGGACGGTGGTCCAGAACGAGCTGGAGTCCCTTCAGCTCGAGTACACCTGGATCAAGGAGTTCGACCCGCGGTTCAACGTGATGTACCGCGACGACAAGACCTATCCCTGGCTGTGCGTCACCTGGAGCGACGAGTTCCCCCGGGTCTTCGTGGGGCGGGGCGCCCACCGGCGCGGATGGCGCTACTTCGGGCCCTTCGGCCAGGCCTGGGCGATCCGCGACACCATGGAGACCCTGCTGAGGGTCTTCCCGATGCGGTCCTGCTCGACCGGGGTCTTCAACCGGGCCCGGGCCCAGGGCCGGCCCTGTCTGCTCGGCTACATCGGCAAGTGCTCGGCCCCCTGCGTGGGACGGATCACCCCCGAGGCCCACCGCGACATCGCCGACGACTTCTGCTCCTTCATGGCCGGCCGCAGCACCGGTCTGGTCCATCGCATCGAGCGGCAGATGGAGGACGCCGCGACCAACCTCGAGTTCGAACGGGCCGCCGTGCTGCGGGACTCCCTGGGCGCCCTGGCCAAGGCCACCGAGCGCAACGCCATCGTGCTGGGCGATGGCACCGACGCCGATGTCATCGCCCTGGCGATGGACCCCCTGGAGGTGGCCGTCAAGATCTTCCACGTGCGCGGCGGACGGGTCCGCGGGGAGCGCGGATGGGTCGCCGACCGGGCCGACGAGGCCGGGGCCCCGGACCTGATGGAGACCTTCCTGCTCCAGCTCTACGGGGCCGGCGACGTCTCCCGCGGCCAGGTCCGCGAGACCGGCCAGGGCCCGGTGGTCCCCAGACTCGTGATGGTCTCCCACGAACCGGCCTCCCTGGACGCGATGACCGATCTGCTGAGCGAGTCCCGAGGCTCCCATGTCGAGATCCGGGTGCCACAACGCGGCGACAAGCGCACCCTGATGGACACCGTCACCCGCAACGCCGAGGAGGCGCTGGCCCAGCACAAGCTGCGCCGGGCCTCCGACCTGGCCACCCGCACCCGGGCCCTCGAGGAGATCCAGGAGGCCCTCGGTCTGGACCGGGCGCCGTTGCGGATGGAGTCCTACGACATCTCCCACATCCAGGGCCATCAGGTGGTCGGCTCGATGGTGGTCTTCGAGGACGGGATGCCCCGCAAGTCCGAGTACCGCCGGTTCATCATCAAGAGCTTCGACGGCTCGGACGACTTCGCCGCCATGCACGAGGTGCTCTCCCGGCGTCTCCGACGGCTGCTGGACGACCGCGAGGCGATGGCCGGGGGAGTCGCCGACGGGGACACCACCGGCACCCTCATCGACCCGACCACCGGCTCCCCCCGGTCGTTCGCCTACGCCCCGAGCCTCATCGTGGTCGACGGCGGCGCCCCCCAGGTGCACGCCGCCCAGGAGGTGCTCGAGGAGTACGGCCTGGCCGACGAGATCGCACTGTGCGGCCTGGCCAAGCGCCTGGAGGAGGTGTGGCTTCCCGACGAGGAGTGGCCGGTCATCCTGCCGCGCACCTCCGAGGGCCTCTACCTGCTGCAGCGACTGCGCGACGAGGCCCACCGGTTCGCCATCACCTTCCACCGGGAGCGCCGGTCCAAGGCCATGATCGAGTCGGTCCTCGACGGGGTCCCCGGGCTCGGCGAGGTCCGCCGCAAGACCCTGATGCAGCACTTCGGCTCCCTCAAGGCGCTGCGCGCCGCCAGCGCCGACCAGATCGGCGAGGTGCCGGGATTCGGCCCGGTGCTGGCCCGCTCGGTGGTCGAGGCGCTGACCGCCGACAGACCGCTGCCCGCAGTCAACACCGCCACCGGCGAGGTCCTCGAGGACGCTCCAACAGCACCCTGA

Protein sequence:

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MADPSSYRPAPGTIPTDPGVYRFSDEHGQVIYVGKAKNLRNRLNSYFQDISALHPRTQRMVTTAAHVQWTVVQNELESLQLEYTWIKEFDPRFNVMYRDDKTYPWLCVTWSDEFPRVFVGRGAHRRGWRYFGPFGQAWAIRDTMETLLRVFPMRSCSTGVFNRARAQGRPCLLGYIGKCSAPCVGRITPEAHRDIADDFCSFMAGRSTGLVHRIERQMEDAATNLEFERAAVLRDSLGALAKATERNAIVLGDGTDADVIALAMDPLEVAVKIFHVRGGRVRGERGWVADRADEAGAPDLMETFLLQLYGAGDVSRGQVRETGQGPVVPRLVMVSHEPASLDAMTDLLSESRGSHVEIRVPQRGDKRTLMDTVTRNAEEALAQHKLRRASDLATRTRALEEIQEALGLDRAPLRMESYDISHIQGHQVVGSMVVFEDGMPRKSEYRRFIIKSFDGSDDFAAMHEVLSRRLRRLLDDREAMAGGVADGDTTGTLIDPTTGSPRSFAYAPSLIVVDGGAPQVHAAQEVLEEYGLADEIALCGLAKRLEEVWLPDEEWPVILPRTSEGLYLLQRLRDEAHRFAITFHRERRSKAMIESVLDGVPGLGEVRRKTLMQHFGSLKALRAASADQIGEVPGFGPVLARSVVEALTADRPLPAVNTATGEVLEDAPTAP

GenBank Info

gene - uvrC
locus_tag - FAM19038-p1-1.1_002676
inference - COORDINATES: similar to AA sequence:RefSeq:WP_013161386.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - excinuclease ABC subunit UvrC
protein_id - extdb:FAM19038-p1-1.1_002676

Gene locus (click to toggle display options) expand

Located on scaffold FAM19038-p1-1_scf0001

Update range to 10000 bp

Cellular location expand

Responsible annotations:
SL-0041: GO:0005618 cell wall
SL-0162: GO:0016020 membrane
SL-0229: GO:0005622 intracellular anatomical structure
SL-0086: GO:0005737 cytoplasm
SL-0039: GO:0005886 plasma membrane
FAM19038-p1-1.1_002675
FAM19038-p1-1.1_002677