locus tag: FAM19038-p1-1.1_002675 genome: FAM19038-p1-1.1
species: Acidipropionibacterium thoenii DSM 20276 taxid: 1122998

Annotations

Type Name Description Pathways
Gene Code
 rapZ
Gene Product
 RNase adapter RapZ
Ortholog
 N0.HOG0001113 RNase adapter RapZ
KEGG gene
 K06958 rapZ; RNase adapter protein RapZ
Gene Ontology
 GO:1901363 heterocyclic compound binding
Gene Ontology
 GO:1901360 organic cyclic compound metabolic process
Gene Ontology
 GO:0097159 organic cyclic compound binding
Gene Ontology
 GO:0090304 nucleic acid metabolic process
Gene Ontology
 GO:0071944 cell periphery
Gene Ontology
 GO:0071704 organic substance metabolic process
Gene Ontology
 GO:0046483 heterocycle metabolic process
Gene Ontology
 GO:0044464 obsolete cell part
Gene Ontology
 GO:0044238 primary metabolic process
Gene Ontology
 GO:0044237 cellular metabolic process
Gene Ontology
 GO:0043170 macromolecule metabolic process
Gene Ontology
 GO:0042802 identical protein binding
Gene Ontology
 GO:0034641 cellular nitrogen compound metabolic process
Gene Ontology
 GO:0016070 RNA metabolic process
Gene Ontology
 GO:0016020 membrane
Gene Ontology
 GO:0010467 gene expression
Gene Ontology
 GO:0009987 cellular process
Gene Ontology
 GO:0008152 metabolic process
Gene Ontology
 GO:0008150 biological_process
Gene Ontology
 GO:0006807 nitrogen compound metabolic process
Gene Ontology
 GO:0006725 cellular aromatic compound metabolic process
Gene Ontology
 GO:0006396 RNA processing
Gene Ontology
 GO:0006139 nucleobase-containing compound metabolic process
Gene Ontology
 GO:0005886 plasma membrane
Gene Ontology
 GO:0005623 obsolete cell
Gene Ontology
 GO:0005575 cellular_component
Gene Ontology
 GO:0005515 protein binding
Gene Ontology
 GO:0005488 binding
Gene Ontology
 GO:0003723 RNA binding
Gene Ontology
 GO:0003676 nucleic acid binding
Gene Ontology
 GO:0003674 molecular_function
Eggnog Protein
 EP:rapZ
Eggnog Ortholog
 EO:2GMWB
Eggnog Description
 ED:Displays ATPase and GTPase activities

Sequences

Nucleotide sequence (GC-content: 69.6 %):

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GTGAGCACACATGACCACTCCAGCCGGGACGACGACACCGGTCCGCAGCGCGTGGTCGTCATCACGGGCATCTCGGGTGCCGGACGGCGCACCGCGGCGCACGCGATGGAGGATCTGGGCTGGTACGTGGTCGACAACCTGCCCCCGACCATGCTGGGGGCGCTCATCGACGAGACCTCCGAGAACGGGGTGGACCGGCTGGCCGTCGTCCTGGACGTCCGCACCCGCCGGATGTTCGAGGGCATCGACGTCGCCCTGACCGACCTCACCCGACGCGGGATCGATCCCGAGACGGTCTTCCTGGAGGCCTCCGACGAGGCGATCGTCAAACGTCAGGAGTCGAGTCGTCGCCCCCTGCCGCTGCAGCACGGCGGCCACCTGATGGACGCCATCTCGCTGGAACGCCGGATGCTCTCGGGGATCCGGGCGGCCGCCGACCTGGTCATCGACACCACCTCGATCAATGCCCGCCAGCTGGCCCAGCGGATCGACTCTGTCTTCGGCGGGGAGGACGCCCCGCTCACCATCCAGTTGATGACCTTCGGGTTCAAGCGAGGCGTGCCGATCGACGCCGACCTGGTCTTCGACGTGCGCTTCCTGCCCAACCCCTACTGGGTGCCGGAGCTGCGGCCCAAGACCGGACTGTCACCCGACGTCGCCTCCTACGTGCTCGCCCAGCCCGGCGCCCGGCAGTTCATCGACCGGGTCGACGAACTGCTCGAGGGAATGGAGCCCGGCTACATCCGGGAGGGCAAGAAGCAGGTGACGGTCGCCATCGGCTGCACCGGCGGCAAGCACCGCAGCACCGCGATCGCCGAGGAGCTGGCCACCCGGCTGCGCTCCAGGGGCCGGCCGGTCGCCGTCCTGCACCGGGATCTGGGAAGGGAGTGA

Protein sequence:

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MSTHDHSSRDDDTGPQRVVVITGISGAGRRTAAHAMEDLGWYVVDNLPPTMLGALIDETSENGVDRLAVVLDVRTRRMFEGIDVALTDLTRRGIDPETVFLEASDEAIVKRQESSRRPLPLQHGGHLMDAISLERRMLSGIRAAADLVIDTTSINARQLAQRIDSVFGGEDAPLTIQLMTFGFKRGVPIDADLVFDVRFLPNPYWVPELRPKTGLSPDVASYVLAQPGARQFIDRVDELLEGMEPGYIREGKKQVTVAIGCTGGKHRSTAIAEELATRLRSRGRPVAVLHRDLGRE

GenBank Info

gene - rapZ
locus_tag - FAM19038-p1-1.1_002675
inference - COORDINATES: similar to AA sequence:RefSeq:WP_020488615.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - RNase adapter RapZ
protein_id - extdb:FAM19038-p1-1.1_002675

Gene locus (click to toggle display options) expand

Located on scaffold FAM19038-p1-1_scf0001

Update range to 10000 bp

Cellular location expand

Responsible annotations:
SL-0162: GO:0016020 membrane
SL-0039: GO:0005886 plasma membrane
FAM19038-p1-1.1_002674
FAM19038-p1-1.1_002676