Annotations

Type Name Description Pathways
Gene Product
helix-turn-helix transcriptional regulator
Ortholog
N0.HOG0002031 helix-turn-helix transcriptional regulator
Eggnog Ortholog
EO:2GN0H
Eggnog Description
ED:Helix-turn-helix XRE-family like proteins

Sequences

Nucleotide sequence (GC-content: 68.9 %):

ATGCCAACCAGCCGGGTGCCAGGTCCTTCAGCACCGAGTCGCTCAGAGTCGACGAACTCGGTACCCAACACGCCCAAGCGGTCCGGCCGTGCACACACTGATCCAGTGCCGGCCACCCCGCAGGAGAGGTTCGGTGCGGCCGTGCGGGCCCGCCGGGCCGAACTGGGAATCACCCTCGAACAGCTCGCCCACGCCAGCGGCGTGTCGGCGGGATCCCTGTCGCGACTCGAGCGCGGATCGCTGAACCCGAGTCTGCAGAGCGCCATCGCGATCTCCGAGAGCCTCGGCAGCGATCTCAACGAGCTCACCCGGCCCGCCGCAGAGCTCACCGTCCTGCGGCGGGATGAGGGTCCCGAGTACGTCGACCCCGACACCGGGATCCGCAGGAAACTGCTGGCCCGGCCGGTCGCCGGCGTCGAACTCATCCACTACACGCTGCCCGGCAGATCCACCACCGCCGAGTTCGCGCCCCATCCGGCCAAGACCGTCGAGACCTTCCACGTCATCACCGGCACGGTGGTGATCCTCACCGACGGTGCCGAACTGGTCCGGCTGGACCACGGGGACACCGCGCAGACGCCGGGGGACCGCTATCACCGGATCTCCAACCCCCTGGATCAGGAGGCCACCCTCACGATCGTCACGACGATCCCGCACTGA

Protein sequence:

MPTSRVPGPSAPSRSESTNSVPNTPKRSGRAHTDPVPATPQERFGAAVRARRAELGITLEQLAHASGVSAGSLSRLERGSLNPSLQSAIAISESLGSDLNELTRPAAELTVLRRDEGPEYVDPDTGIRRKLLARPVAGVELIHYTLPGRSTTAEFAPHPAKTVETFHVITGTVVILTDGAELVRLDHGDTAQTPGDRYHRISNPLDQEATLTIVTTIPH

GenBank Info

locus_tag - FAM19038-p1-1.1_002612
inference - COORDINATES: similar to AA sequence:RefSeq:WP_003078594.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - helix-turn-helix transcriptional regulator
protein_id - extdb:FAM19038-p1-1.1_002612

Gene locus (click to toggle display options) expand

Located on scaffold FAM19038-p1-1_scf0001

Update range to 10000 bp

FAM19038-p1-1.1_002611
FAM19038-p1-1.1_002613