contig:
FAM19471-i1-1.1_scf17
genome:
FAM19471-i1-1.1
species:
Limosilactobacillus fermentum
taxid:
1613
Metadata
| Contig type |
Scaffold |
| Is Circular |
No |
| Is Plasmid |
No |
| GC-content |
53.4 % |
| Length |
36437 bp |
| Gene count |
34 |
Genes on this contig
| Gene ID |
Product |
Gene code |
Start ↑ |
End |
Length |
Strand |
|
FAM19471-i1-1.1_001009
|
Fic family protein |
GC:pseudo-gene |
525 |
1042 |
517 |
forward
|
|
FAM19471-i1-1.1_001010
|
sugar O-acetyltransferase |
|
1129 |
1695 |
566 |
reverse
|
|
FAM19471-i1-1.1_001011
|
sugar O-acetyltransferase |
|
1809 |
2450 |
641 |
forward
|
|
FAM19471-i1-1.1_001012
|
branched-chain amino acid aminotransferase |
|
3088 |
4119 |
1031 |
forward
|
|
FAM19471-i1-1.1_001013
|
amino acid permease |
|
4277 |
5755 |
1478 |
forward
|
|
FAM19471-i1-1.1_001014
|
aspartate/glutamate racemase family protein |
|
5808 |
6572 |
764 |
reverse
|
|
FAM19471-i1-1.1_001015
|
NAD/NADP octopine/nopaline dehydrogenase |
|
6572 |
7798 |
1226 |
reverse
|
|
FAM19471-i1-1.1_001016
|
ClC family H(+)/Cl(-) exchange transporter |
GC:pseudo-gene |
8305 |
9570 |
1265 |
forward
|
|
FAM19471-i1-1.1_001017
|
multidrug efflux MFS transporter |
|
9641 |
9931 |
290 |
reverse
|
|
FAM19471-i1-1.1_001018
|
hypothetical protein |
|
9918 |
10073 |
155 |
reverse
|
|
FAM19471-i1-1.1_001019
|
hypothetical protein |
|
10088 |
10291 |
203 |
forward
|
|
FAM19471-i1-1.1_001020
|
OFA family MFS transporter |
|
10418 |
11767 |
1349 |
reverse
|
|
FAM19471-i1-1.1_001021
|
DUF554 domain-containing protein |
|
12354 |
13034 |
680 |
reverse
|
|
FAM19471-i1-1.1_001022
|
replication-associated recombination protein A |
|
13031 |
14377 |
1346 |
reverse
|
|
FAM19471-i1-1.1_001023
|
hypothetical protein |
|
14392 |
14763 |
371 |
reverse
|
|
FAM19471-i1-1.1_001024
|
phosphoenolpyruvate carboxykinase |
|
14859 |
16568 |
1709 |
reverse
|
|
FAM19471-i1-1.1_001025
|
cytosine deaminase |
GC:codA |
16731 |
17969 |
1238 |
reverse
|
|
FAM19471-i1-1.1_001026
|
cytosine permease |
|
17972 |
19330 |
1358 |
reverse
|
|
FAM19471-i1-1.1_001027
|
GAF domain-containing protein |
|
19487 |
19942 |
455 |
reverse
|
|
FAM19471-i1-1.1_001028
|
N-acetyltransferase |
|
19935 |
20444 |
509 |
reverse
|
|
FAM19471-i1-1.1_001029
|
peptide-methionine (R)-S-oxide reductase MsrB |
GC:msrB |
20597 |
21022 |
425 |
reverse
|
|
FAM19471-i1-1.1_001030
|
iron-sulfur cluster biosynthesis family protein |
|
21032 |
21424 |
392 |
reverse
|
|
FAM19471-i1-1.1_001031
|
manganese-dependent inorganic pyrophosphatase |
|
21618 |
22550 |
932 |
reverse
|
|
FAM19471-i1-1.1_001032
|
DUF1440 domain-containing protein |
|
22661 |
23176 |
515 |
reverse
|
|
FAM19471-i1-1.1_001033
|
DNA topoisomerase IV subunit A |
GC:parC |
23242 |
25710 |
2468 |
reverse
|
|
FAM19471-i1-1.1_001034
|
DNA topoisomerase IV subunit B |
GC:parE |
25727 |
27724 |
1997 |
reverse
|
|
FAM19471-i1-1.1_001035
|
glycerol-3-phosphate acyltransferase |
|
27956 |
28567 |
611 |
forward
|
|
FAM19471-i1-1.1_001036
|
aldose 1-epimerase family protein |
|
28635 |
29513 |
878 |
reverse
|
|
FAM19471-i1-1.1_001037
|
tyrosine-type recombinase/integrase |
|
29529 |
30371 |
842 |
reverse
|
|
FAM19471-i1-1.1_001038
|
type I DNA topoisomerase |
GC:topA |
30500 |
32632 |
2132 |
reverse
|
|
FAM19471-i1-1.1_001039
|
DNA-protecting protein DprA |
GC:dprA |
32715 |
33590 |
875 |
reverse
|
|
FAM19471-i1-1.1_001040
|
ribonuclease HII |
|
33643 |
34413 |
770 |
reverse
|
|
FAM19471-i1-1.1_001041
|
ribosome biogenesis GTPase YlqF |
GC:ylqF |
34406 |
35278 |
872 |
reverse
|
|
FAM19471-i1-1.1_001042
|
site-specific integrase |
GC:pseudo-gene |
35415 |
36311 |
896 |
reverse
|