contig:
FAM19471-i1-1.1_scf15
genome:
FAM19471-i1-1.1
species:
Limosilactobacillus fermentum
taxid:
1613
Metadata
| Contig type |
Scaffold |
| Is Circular |
No |
| Is Plasmid |
No |
| GC-content |
42.9 % |
| Length |
38985 bp |
| Gene count |
44 |
Genes on this contig
| Gene ID |
Product |
Gene code |
Start ↑ |
End |
Length |
Strand |
|
FAM19471-i1-1.1_000931
|
transposase family protein |
|
1 |
602 |
601 |
forward
|
|
FAM19471-i1-1.1_000932
|
Crp/Fnr family transcriptional regulator |
|
679 |
1329 |
650 |
reverse
|
|
FAM19471-i1-1.1_000933
|
iron-sulfur cluster repair di-iron protein- ric |
|
1354 |
1635 |
281 |
reverse
|
|
FAM19471-i1-1.1_000934
|
heavy-metal-associated domain-containing protein |
|
1687 |
1914 |
227 |
reverse
|
|
FAM19471-i1-1.1_000935
|
heavy metal translocating P-type ATPase |
|
1937 |
3865 |
1928 |
reverse
|
|
FAM19471-i1-1.1_000936
|
hypothetical protein |
|
4014 |
4574 |
560 |
reverse
|
|
FAM19471-i1-1.1_000937
|
hypothetical protein |
|
5242 |
5478 |
236 |
reverse
|
|
FAM19471-i1-1.1_000938
|
type I restriction endonuclease subunit R |
|
5503 |
8619 |
3116 |
reverse
|
|
FAM19471-i1-1.1_000939
|
restriction endonuclease subunit S |
GC:pseudo-gene |
9226 |
9777 |
551 |
reverse
|
|
FAM19471-i1-1.1_000940
|
tyrosine-type recombinase/integrase |
|
9774 |
10742 |
968 |
reverse
|
|
FAM19471-i1-1.1_000941
|
restriction endonuclease subunit S |
|
10815 |
11420 |
605 |
reverse
|
|
FAM19471-i1-1.1_000942
|
restriction endonuclease subunit S |
GC:pseudo-gene |
11484 |
12005 |
521 |
reverse
|
|
FAM19471-i1-1.1_000943
|
SAM-dependent DNA methyltransferase |
|
11995 |
13527 |
1532 |
reverse
|
|
FAM19471-i1-1.1_000944
|
helix-turn-helix transcriptional regulator |
|
13530 |
13736 |
206 |
reverse
|
|
FAM19471-i1-1.1_000945
|
hypothetical protein |
|
13893 |
14762 |
869 |
reverse
|
|
FAM19471-i1-1.1_000946
|
sigma-70 family RNA polymerase sigma factor |
|
15184 |
15642 |
458 |
forward
|
|
FAM19471-i1-1.1_000947
|
hypothetical protein |
|
15724 |
15927 |
203 |
forward
|
|
FAM19471-i1-1.1_000948
|
hypothetical protein |
|
15911 |
16228 |
317 |
forward
|
|
FAM19471-i1-1.1_000949
|
DUF2800 domain-containing protein |
|
16225 |
17364 |
1139 |
forward
|
|
FAM19471-i1-1.1_000950
|
DUF2815 family protein |
|
17342 |
17917 |
575 |
forward
|
|
FAM19471-i1-1.1_000951
|
DNA polymerase |
|
17973 |
19907 |
1934 |
forward
|
|
FAM19471-i1-1.1_000952
|
hypothetical protein |
|
19974 |
20378 |
404 |
forward
|
|
FAM19471-i1-1.1_000953
|
DNA primase |
|
20381 |
22636 |
2255 |
forward
|
|
FAM19471-i1-1.1_000954
|
VRR-NUC domain-containing protein |
|
22850 |
23131 |
281 |
forward
|
|
FAM19471-i1-1.1_000955
|
DEAD/DEAH box helicase |
|
23112 |
24467 |
1355 |
forward
|
|
FAM19471-i1-1.1_000956
|
restriction endonuclease |
|
24464 |
24931 |
467 |
forward
|
|
FAM19471-i1-1.1_000957
|
HNH endonuclease |
|
25079 |
25456 |
377 |
forward
|
|
FAM19471-i1-1.1_000958
|
P27 family phage terminase small subunit |
|
25576 |
26118 |
542 |
forward
|
|
FAM19471-i1-1.1_000959
|
DNA modification methylase |
|
26118 |
27344 |
1226 |
forward
|
|
FAM19471-i1-1.1_000960
|
hypothetical protein |
|
27417 |
28037 |
620 |
forward
|
|
FAM19471-i1-1.1_000961
|
DUF5049 domain-containing protein |
|
28040 |
28246 |
206 |
forward
|
|
FAM19471-i1-1.1_000962
|
terminase large subunit |
GC:pseudo-gene |
28314 |
28585 |
271 |
forward
|
|
FAM19471-i1-1.1_000963
|
SDR family oxidoreductase |
|
28524 |
28922 |
398 |
reverse
|
|
FAM19471-i1-1.1_000964
|
ammonium transporter |
|
29191 |
30378 |
1187 |
forward
|
|
FAM19471-i1-1.1_000965
|
FAD-dependent oxidoreductase |
|
30423 |
31763 |
1340 |
reverse
|
|
FAM19471-i1-1.1_000966
|
LLM class flavin-dependent oxidoreductase |
|
32018 |
32554 |
536 |
forward
|
|
FAM19471-i1-1.1_000967
|
oxidoreductase |
GC:pseudo-gene |
32596 |
33103 |
507 |
forward
|
|
FAM19471-i1-1.1_000968
|
phage major capsid protein |
GC:pseudo-gene |
33444 |
33752 |
308 |
forward
|
|
FAM19471-i1-1.1_000969
|
phage gp6-like head-tail connector protein |
|
33769 |
34047 |
278 |
forward
|
|
FAM19471-i1-1.1_000970
|
phage head closure protein |
|
34047 |
34430 |
383 |
forward
|
|
FAM19471-i1-1.1_000971
|
phage holin family protein |
|
34417 |
34827 |
410 |
forward
|
|
FAM19471-i1-1.1_000972
|
hypothetical protein |
|
35297 |
35530 |
233 |
forward
|
|
FAM19471-i1-1.1_000973
|
recombinase family protein |
|
35566 |
37224 |
1658 |
forward
|
|
FAM19471-i1-1.1_000974
|
recombinase family protein |
|
37217 |
38794 |
1577 |
forward
|