locus tag: FAM19471-i1-1.1_001145 genome: FAM19471-i1-1.1
species: Limosilactobacillus fermentum taxid: 1613

Annotations

Type Name Description Pathways
Ortholog
 N0.HOG0000781 ClC family H(+)/Cl(-) exchange transporter
KEGG gene
 K03499 trkA, ktrA; trk system potassium uptake protein
KEGG gene
 K03281 TC.CIC; chloride channel protein, CIC family
Gene Ontology
 GO:1902600 proton transmembrane transport
Gene Ontology
 GO:0098662 inorganic cation transmembrane transport
Gene Ontology
 GO:0098660 inorganic ion transmembrane transport
Gene Ontology
 GO:0098655 cation transmembrane transport
Gene Ontology
 GO:0071944 cell periphery
Gene Ontology
 GO:0071705 nitrogen compound transport
Gene Ontology
 GO:0055085 transmembrane transport
Gene Ontology
 GO:0051234 establishment of localization
Gene Ontology
 GO:0051179 localization
Gene Ontology
 GO:0044464 obsolete cell part
Gene Ontology
 GO:0044459 obsolete plasma membrane part
Gene Ontology
 GO:0044425 obsolete membrane part
Gene Ontology
 GO:0043168 anion binding
Gene Ontology
 GO:0043167 ion binding
Gene Ontology
 GO:0042802 identical protein binding
Gene Ontology
 GO:0034220 ion transmembrane transport
Gene Ontology
 GO:0031404 chloride ion binding
Gene Ontology
 GO:0031226 intrinsic component of plasma membrane
Gene Ontology
 GO:0031224 intrinsic component of membrane
Gene Ontology
 GO:0022890 inorganic cation transmembrane transporter activity
Gene Ontology
 GO:0022857 transmembrane transporter activity
Gene Ontology
 GO:0022804 active transmembrane transporter activity
Gene Ontology
 GO:0016021 integral component of membrane
Gene Ontology
 GO:0016020 membrane
Gene Ontology
 GO:0015706 nitrate transport
Gene Ontology
 GO:0015698 inorganic anion transport
Gene Ontology
 GO:0015672 monovalent inorganic cation transport
Gene Ontology
 GO:0015318 inorganic molecular entity transmembrane transporter activity
Gene Ontology
 GO:0015299 solute:proton antiporter activity
Gene Ontology
 GO:0015298 solute:cation antiporter activity
Gene Ontology
 GO:0015297 antiporter activity
Gene Ontology
 GO:0015291 secondary active transmembrane transporter activity
Gene Ontology
 GO:0015078 proton transmembrane transporter activity
Gene Ontology
 GO:0015077 monovalent inorganic cation transmembrane transporter activity
Gene Ontology
 GO:0015075 ion transmembrane transporter activity
Gene Ontology
 GO:0008324 cation transmembrane transporter activity
Gene Ontology
 GO:0008150 biological_process
Gene Ontology
 GO:0006821 chloride transport
Gene Ontology
 GO:0006820 anion transport
Gene Ontology
 GO:0006812 cation transport
Gene Ontology
 GO:0006811 ion transport
Gene Ontology
 GO:0006810 transport
Gene Ontology
 GO:0005887 integral component of plasma membrane
Gene Ontology
 GO:0005886 plasma membrane
Gene Ontology
 GO:0005623 obsolete cell
Gene Ontology
 GO:0005575 cellular_component
Gene Ontology
 GO:0005515 protein binding
Gene Ontology
 GO:0005488 binding
Gene Ontology
 GO:0005215 transporter activity
Gene Ontology
 GO:0003674 molecular_function
Eggnog Protein
 EP:clcA
Eggnog Ortholog
 EO:1TPX0
Eggnog Description
 ED:chloride
Gene Product
 ClC family H(+)/Cl(-) exchange transporter

Sequences

Nucleotide sequence (GC-content: 54.6 %):

Download Copy to clipboard
GTGTTCAGATTTAAATTTTTAAAGTATAGCAACGCCCGGTCGGTGGGACGGGCAATTGTGATTGGGGTGGCCGTTGGGTTAGTGGCCTCGGTCTTTCGGTTGGCGATTCAAGACGTCTTGGTCCTCACCAAGCTGGCCTTTTTGTTCTTCCACCAGCAGCCGCTATGGCTATTGGCGTGGGTAGCGGTAACCGTCCCGTTAGCCCTTTTCTTGGGGCGGATGGCCCAAAAGAACCCCAACATTAAGGGCTCGGGGATTCCGCAAGTCGAAGGTCAGTTAACGGGCCAGTTCGACGAGCAATGGTGGCCAGTCTTGTGGCGCAAGTTCTTTGGGGGTATCCTTTCCATCGGTCCCGGTCTCTTCTTGGGACGGGAAGGACCGTCAATTCAAGTCGGGGCCACGGTTGGCCAAGGCATCGTCGAGGGGCGGGGAAAGAAGAAACTGACCGCCATTGAGCGTCGGGTGGGGATCGCCTCCGGAGCGGCTGCTGGGCTTTCGGCGGCCTTCAACGCCCCGATCGCTTCCTCAATGTTTGTCTTAGAAGAGGTTTACCATAACTTCTCCCCGTTAGTATGGCTATCGGTGTTTATTTCCTCGATCAGTGCCAACTTTGTGTCGATGCAATTCTTTGGCCTCAAGCCGGATTTAGACCTGCCCCACGAAATGTATTTCCCGGTCAATCAGTACGGGTACCTATTGTTATTAGGGTTCTTCTTGGGGATTTTAGGGCGGCTGTATCAGTACGTGATCCTACGGCTAGGGACGTGGAGCCGCAAGGTAACGTGGTTTAAGCCCGCTTGGTACCCGGTGATCCCATTCTTGTTGGTGATTCCAATTGCTTGGTGGTGGCCAAACACGCTGGGGGGCGGTAACGGGTTGATTATTAGTTTGACCAACCTGCCGACCTCAGTGAGCCTCTTTTTGTGGTTGTTTGTCCTCCGGTTTGTCTTCTCCATGATTTCCTACGGTTCTGAATTGCCCGGGGGGATTTTCTTACCGATTTTGACCTTGGGAGCCGTTCTCGGCGGGCTGTACTGCGTCATTTTGATTCACCTGGGCCTAATTCCGGCGCGCTTTTTAGCCAACTACGTGATTTACGCCATGGCCGGCTACTTTGCCTGCATTTCCAAGGCGCCCTTCACGGCGATCCTGTTGATTACGGAAATGGTGGGTTCCCTAGCCCACCTCATGCCGTTAGCGGTGGTGGCGGTGGTGGCCTACCTAGTCGTGGACGTCTTAGGCGGTGCTCCCGTCTACACGGCCATGTTTGAAAGCTTCATTCATCGTCAACCACACCAGTCCCTGGAGGGGATTACGCAGATGACGACGACCATCTACGCCGGGACCGCCCTTGACGGCGCCTTAGTTAAAGACTACCCGTGGCCACCATCCTGTTTGATTTTAATGGTTTACCGGGGCGAAGAAGAAATCGTTCCCCACGGTGATACCCGCCTCCAGGTCGGTGACACCCTAGTAATCCAGCTAACCGGGGCCAGTCACCTCAAGTCCCAACAAGCGATCATTAGCGGTGCCCACCAGGTGATTGATTAG

Protein sequence:

Download Copy to clipboard
MFRFKFLKYSNARSVGRAIVIGVAVGLVASVFRLAIQDVLVLTKLAFLFFHQQPLWLLAWVAVTVPLALFLGRMAQKNPNIKGSGIPQVEGQLTGQFDEQWWPVLWRKFFGGILSIGPGLFLGREGPSIQVGATVGQGIVEGRGKKKLTAIERRVGIASGAAAGLSAAFNAPIASSMFVLEEVYHNFSPLVWLSVFISSISANFVSMQFFGLKPDLDLPHEMYFPVNQYGYLLLLGFFLGILGRLYQYVILRLGTWSRKVTWFKPAWYPVIPFLLVIPIAWWWPNTLGGGNGLIISLTNLPTSVSLFLWLFVLRFVFSMISYGSELPGGIFLPILTLGAVLGGLYCVILIHLGLIPARFLANYVIYAMAGYFACISKAPFTAILLITEMVGSLAHLMPLAVVAVVAYLVVDVLGGAPVYTAMFESFIHRQPHQSLEGITQMTTTIYAGTALDGALVKDYPWPPSCLILMVYRGEEEIVPHGDTRLQVGDTLVIQLTGASHLKSQQAIISGAHQVID

GenBank Info

locus_tag - FAM19471-i1-1.1_001145
inference - COORDINATES: similar to AA sequence:RefSeq:WP_012390878.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - ClC family H(+)/Cl(-) exchange transporter
protein_id - extdb:FAM19471-i1-1.1_001145

Gene locus (click to toggle display options) expand

Located on scaffold FAM19471-i1-1_scf0020

Update range to 10000 bp

Cellular location expand

Responsible annotations:
SL-0162: GO:0016020 membrane
SL-0039: GO:0005886 plasma membrane
FAM19471-i1-1.1_001144
FAM19471-i1-1.1_001146