locus tag: FAM19471-i1-1.1_001088 genome: FAM19471-i1-1.1
species: Limosilactobacillus fermentum taxid: 1613

Annotations

Type Name Description Pathways
Gene Product
 TIGR00730 family Rossman fold protein
KEGG reaction
 R00510 cytidine-5'-monophosphate phosphoribohydrolase; CMP + H2O <=> Cytosine + D-Ribose 5-phosphate kornec01100 kornec00240
KEGG reaction
 R00182 AMP phosphoribohydrolase; AMP + H2O <=> Adenine + D-Ribose 5-phosphate kornec01100 kornec00230
Ortholog
 N0.HOG0001183 TIGR00730 family Rossman fold protein
KEGG gene
 K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-] kornec01100 kornec00230 kornec00240
Eggnog Protein
 EP:yvdD
Eggnog Ortholog
 EO:1UKED
Eggnog Description
 ED:Belongs to the LOG family
EC Number
 EC:3.2.2.10 pyrimidine-5'-nucleotide nucleosidase; pyrimidine nucleotide N-ribosidase; Pyr5N kornec01100 kornec00240

Occurs in the following pathway maps:

Pathway Description
kornec00230 Purine metabolism
kornec00240 Pyrimidine metabolism
kornec01100 Metabolic pathways

Sequences

Nucleotide sequence (GC-content: 57.2 %):

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ATGTTAAAACGATTAGCAGTGTATTGCGGCGCCCGCGCTGGGCAGGACCCTTCCTTTATGGAAATGGCAACTGACTTTGGCCACCAGATGGCCGAACACGACGTCGCCCTGGTTTACGGTGGCGGTCGCTTCGGTCTTATGGGGGCGGTGGCCGACGCCGTCTTGGAAGCCGGTGGCCAGGCCCACGGGGTGATTACCGAAGAACTGGCCAACCGGGGTACTAGCCACCCGGACCTGACCAGCCTAGAAATCGTTGACGACATGAACACCCGCAAGAACCAAATGATGGAAATGGCGGACGGCTTACTCGCCCTCCCCGGTGGCCTGGGAACCCTAGAAGAAGTTAGCGAGGCCTTTTCCTGGACCGCCCTGGGCGATAACGCTAAACCGGTCGCCCTCTACAACTACCGCAACTTCTACCAACCCTTAAAGGACATGCTGGCCACGATGGAGATGACCGGCTTTACCGAACCGCCCTACGTCAACGCAATTAAGTTCGCCACCAACTTTGATGAGGTCGCCGACTTCATGAATCATTACCAGGCTCCGGCGATCCGTACTTACGAATAA

Protein sequence:

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MLKRLAVYCGARAGQDPSFMEMATDFGHQMAEHDVALVYGGGRFGLMGAVADAVLEAGGQAHGVITEELANRGTSHPDLTSLEIVDDMNTRKNQMMEMADGLLALPGGLGTLEEVSEAFSWTALGDNAKPVALYNYRNFYQPLKDMLATMEMTGFTEPPYVNAIKFATNFDEVADFMNHYQAPAIRTYE

GenBank Info

locus_tag - FAM19471-i1-1.1_001088
inference - COORDINATES: similar to AA sequence:RefSeq:WP_003684112.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - TIGR00730 family Rossman fold protein
protein_id - extdb:FAM19471-i1-1.1_001088

Gene locus (click to toggle display options) expand

Located on scaffold FAM19471-i1-1_scf0019

Update range to 10000 bp
FAM19471-i1-1.1_001087
FAM19471-i1-1.1_001089