locus tag: FAM19471-i1-1.1_001075 genome: FAM19471-i1-1.1
species: Limosilactobacillus fermentum taxid: 1613

Annotations

Type Name Description Pathways
Gene Code
 menB
KEGG reaction
 R07263 4-(2-carboxyphenyl)-4-oxobutanoyl-CoA dehydratase (cyclizing); 2-Succinylbenzoyl-CoA <=> 1,4-Dihydroxy-2-naphthoyl-CoA + H2O kornec01100 kornec00130 kornec01240 kornec01110
Ortholog
 N0.HOG0001508 1,4-dihydroxy-2-naphthoyl-CoA synthase
KEGG gene
 K01661 menB; naphthoate synthase [EC:4.1.3.36] kornec01100 kornec00130 kornec01240 kornec01110
Gene Ontology
 GO:1901663 quinone biosynthetic process
Gene Ontology
 GO:1901661 quinone metabolic process
Gene Ontology
 GO:1901576 organic substance biosynthetic process
Gene Ontology
 GO:0071944 cell periphery
Gene Ontology
 GO:0071890 bicarbonate binding
Gene Ontology
 GO:0071840 cellular component organization or biogenesis
Gene Ontology
 GO:0071704 organic substance metabolic process
Gene Ontology
 GO:0065003 protein-containing complex assembly
Gene Ontology
 GO:0051259 protein complex oligomerization
Gene Ontology
 GO:0051188 obsolete cofactor biosynthetic process
Gene Ontology
 GO:0051186 obsolete cofactor metabolic process
Gene Ontology
 GO:0044464 obsolete cell part
Gene Ontology
 GO:0044283 small molecule biosynthetic process
Gene Ontology
 GO:0044281 small molecule metabolic process
Gene Ontology
 GO:0044249 cellular biosynthetic process
Gene Ontology
 GO:0044237 cellular metabolic process
Gene Ontology
 GO:0044085 cellular component biogenesis
Gene Ontology
 GO:0043933 protein-containing complex subunit organization
Gene Ontology
 GO:0043168 anion binding
Gene Ontology
 GO:0043167 ion binding
Gene Ontology
 GO:0042181 ketone biosynthetic process
Gene Ontology
 GO:0042180 cellular ketone metabolic process
Gene Ontology
 GO:0034214 protein hexamerization
Gene Ontology
 GO:0022607 cellular component assembly
Gene Ontology
 GO:0016833 oxo-acid-lyase activity
Gene Ontology
 GO:0016830 carbon-carbon lyase activity
Gene Ontology
 GO:0016829 lyase activity
Gene Ontology
 GO:0016043 cellular component organization
Gene Ontology
 GO:0016020 membrane
Gene Ontology
 GO:0009987 cellular process
Gene Ontology
 GO:0009234 menaquinone biosynthetic process
Gene Ontology
 GO:0009233 menaquinone metabolic process
Gene Ontology
 GO:0009108 obsolete coenzyme biosynthetic process
Gene Ontology
 GO:0009058 biosynthetic process
Gene Ontology
 GO:0008935 1,4-dihydroxy-2-naphthoyl-CoA synthase activity
Gene Ontology
 GO:0008152 metabolic process
Gene Ontology
 GO:0008150 biological_process
Gene Ontology
 GO:0006732 obsolete coenzyme metabolic process
Gene Ontology
 GO:0005886 plasma membrane
Gene Ontology
 GO:0005623 obsolete cell
Gene Ontology
 GO:0005575 cellular_component
Gene Ontology
 GO:0005488 binding
Gene Ontology
 GO:0003824 catalytic activity
Gene Ontology
 GO:0003674 molecular_function
Eggnog Protein
 EP:menB
Eggnog Ortholog
 EO:1UHNU
Eggnog Description
 ED:Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1
EC Number
 EC:4.1.3.36 1,4-dihydroxy-2-naphthoyl-CoA synthase; naphthoate synthase; 1,4-dihydroxy-2-naphthoate synthase; dihydroxynaphthoate synthase; o-succinylbenzoyl-CoA 1,4-dihydroxy-2-naphthoate-lyase (cyclizing); MenB; o-succinylbenzoyl-CoA dehydratase (cyclizing) kornec01100 kornec00130 kornec01110
Gene Product
 1-4-dihydroxy-2-naphthoyl-CoA synthase

Occurs in the following pathway maps:

Pathway Description
kornec00130 Ubiquinone and other terpenoid-quinone biosynthesis
kornec01100 Metabolic pathways
kornec01110 Biosynthesis of secondary metabolites
kornec01240 Biosynthesis of cofactors

Sequences

Nucleotide sequence (GC-content: 53.5 %):

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ATGACGAGTGCTAACTGGACCCCCGTTAAGGAGTATTCCGAAATTATTTTTGAACGCGACGATAAGATCGCCAAGATTACGATGAACCGGCCGGAAAAGCACAATGCCTTCACCCCGGTAACGGTCGCCGAAATGATCGACGCGTTTAACATCTGTCGTGATGATAGCACAATTGGAGTGATTATTCTTACCGGAGCCGGCGATAAGGCCTTTTCTTCCGGTGGTGACCAATCCGTGCGGGGTAACGGGGGTTACGTTGGCCCCGACCACATCGCCCGGCTCAACGTTTTGGATCTCCAACACTTGATTCGGATCATCCCCAAGCCGGTAATTGCCATGGTCAAGGGCTGGTCAGTCGGGGGCGGGAACGTCTTACAACTGGTTTGTGACCTGACGATCGCCGCCGACAACGCCATGTTTGGGCAAACGGGGCCGAAGGTGGGTTCCTTTGACGCCGGTTATGGCTCGGGTTACCTAGCCCGGGTGATCGGCCACAAGCGGGCCAAGGAAGTTTGGTTCTTAAACCACTTCTACACGGCTGACGAAGCTTACCAAATGAACTGGATTAACAAGGTGGCGCCCCTAGCTGAGGTCGAATCAGTTACTTTAGACTGGTGTCATGAAATCTTAAAGAAGTCACCGACCGCCCTTCGCTTCATTAAGGCGGCCATGAACGCCGATACAGATGGTTTAGCGGGGCTTCAACAATTTGCCGGTGACGCCACGATGCTTTACTACACGACTGACGAAGGAAAGGAAGGGCGCGACGCCTTTAACCAAAAGCGCGACCCCGACTTCGATAAGTTCCCGAAGTTCCCGTAG

Protein sequence:

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MTSANWTPVKEYSEIIFERDDKIAKITMNRPEKHNAFTPVTVAEMIDAFNICRDDSTIGVIILTGAGDKAFSSGGDQSVRGNGGYVGPDHIARLNVLDLQHLIRIIPKPVIAMVKGWSVGGGNVLQLVCDLTIAADNAMFGQTGPKVGSFDAGYGSGYLARVIGHKRAKEVWFLNHFYTADEAYQMNWINKVAPLAEVESVTLDWCHEILKKSPTALRFIKAAMNADTDGLAGLQQFAGDATMLYYTTDEGKEGRDAFNQKRDPDFDKFPKFP

GenBank Info

gene - menB
locus_tag - FAM19471-i1-1.1_001075
EC_number - 4.1.3.36
inference - COORDINATES: similar to AA sequence:RefSeq:WP_020280615.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - 1,4-dihydroxy-2-naphthoyl-CoA synthase
protein_id - extdb:FAM19471-i1-1.1_001075

Gene locus (click to toggle display options) expand

Located on scaffold FAM19471-i1-1_scf0018

Update range to 10000 bp

Cellular location expand

Responsible annotations:
SL-0162: GO:0016020 membrane
SL-0039: GO:0005886 plasma membrane
FAM19471-i1-1.1_001074
FAM19471-i1-1.1_001076