locus tag: FAM19471-i1-1.1_001066 genome: FAM19471-i1-1.1
species: Limosilactobacillus fermentum taxid: 1613

Annotations

Type Name Description Pathways
Gene Product
 pyridoxamine 5'-phosphate oxidase family protein
Ortholog
 N0.HOG0002250 pyridoxamine 5'-phosphate oxidase family protein
Gene Ontology
 GO:0044464 obsolete cell part
Gene Ontology
 GO:0044424 obsolete intracellular part
Gene Ontology
 GO:0005737 cytoplasm
Gene Ontology
 GO:0005623 obsolete cell
Gene Ontology
 GO:0005622 intracellular anatomical structure
Gene Ontology
 GO:0005575 cellular_component
Eggnog Ortholog
 EO:1VGE7
Eggnog Description
 ED:pyridoxamine 5-phosphate

Sequences

Nucleotide sequence (GC-content: 53.2 %):

Download Copy to clipboard
ATGCTTGAAAAAAGTACCACCCTTACCAAGGGCCTATTAGAAATCATGCCAGATCCGCAGCCAGTCACCATCGTCTCCGTCGAAGGTAATCCGGCGCACGTCGTTAACACCTGGAGCGACTACGTTCAGGTTATTGATGACCAAACCTTCTTAATTCCGGCCGCCGGGATGCGGTCAATTGAAGCCGACGTCCAGAAAAAGTCCAGTCCGTTAACGATCGCCTTTGGCTCCAAGAAGTTTGCAGGAACCGAAGGGATGGGGCGGGGCTACCACGTCCACGCAACCGGGGAGTTCTTAGCCAGCGGCGAATACTTCGACCAGATGAAGGCTAACTTCCCTTGGCTGCGGAAAGTCCTGGTCGTGCACGTAACCGACGTAGAACAAAAAATCTGA

Protein sequence:

Download Copy to clipboard
MLEKSTTLTKGLLEIMPDPQPVTIVSVEGNPAHVVNTWSDYVQVIDDQTFLIPAAGMRSIEADVQKKSSPLTIAFGSKKFAGTEGMGRGYHVHATGEFLASGEYFDQMKANFPWLRKVLVVHVTDVEQKI

GenBank Info

locus_tag - FAM19471-i1-1.1_001066
inference - COORDINATES: similar to AA sequence:RefSeq:WP_006293533.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - pyridoxamine 5'-phosphate oxidase family protein
protein_id - extdb:FAM19471-i1-1.1_001066

Gene locus (click to toggle display options) expand

Located on scaffold FAM19471-i1-1_scf0018

Update range to 10000 bp

Cellular location expand

Responsible annotations:
SL-0229: GO:0005622 intracellular anatomical structure
SL-0086: GO:0005737 cytoplasm
FAM19471-i1-1.1_001065
FAM19471-i1-1.1_001067