locus tag: FAM19471-i1-1.1_000951 genome: FAM19471-i1-1.1
species: Limosilactobacillus fermentum taxid: 1613

Annotations

Type Name Description Pathways
KEGG reaction
 R00378 deoxythymidine triphosphate:DNA deoxynucleotidyltransferase (DNA-directed); dTTP + DNA <=> Diphosphate + DNA
KEGG reaction
 R00377 Deoxycytidine triphosphate:DNA deoxynucleotidyltransferase (DNA-directed); dCTP + DNA <=> Diphosphate + DNA
KEGG reaction
 R00376 Deoxyguanosine 5'-triphosphate:DNA deoxynucleotidyltransferase (DNA-directed); dGTP + DNA <=> Diphosphate + DNA
KEGG reaction
 R00375 Deoxyadenosine 5'-triphosphate:DNA deoxynucleotidyltransferase (DNA-directed); dATP + DNA <=> Diphosphate + DNA
Ortholog
 N0.HOG0005908 DNA polymerase
KEGG gene
 K02335 polA; DNA polymerase I [EC:2.7.7.7] kornec03030 kornec03440 kornec03410 kornec03420
KEGG gene
 K02334 dpo; DNA polymerase bacteriophage-type [EC:2.7.7.7]
Eggnog Protein
 EP:polA_2
Eggnog Ortholog
 EO:1TPTJ
Eggnog Description
 ED:DNA polymerase
EC Number
 EC:2.7.7.7 DNA-directed DNA polymerase; DNA polymerase I; DNA polymerase II; DNA polymerase III; DNA polymerase alpha; DNA polymerase beta; DNA polymerase gamma; DNA nucleotidyltransferase (DNA-directed); deoxyribonucleate nucleotidyltransferase; deoxynucleate polymerase; deoxyribonucleic acid duplicase; deoxyribonucleic acid polymerase; deoxyribonucleic duplicase; deoxyribonucleic polymerase; deoxyribonucleic polymerase I; DNA duplicase; DNA nucleotidyltransferase; DNA polymerase; DNA replicase; DNA-dependent DNA polymerase; duplicase; Klenow fragment; sequenase; Taq DNA polymerase; Taq Pol I; Tca DNA polymerase
Gene Product
 DNA polymerase

Occurs in the following pathway maps:

Pathway Description
kornec03030 DNA replication
kornec03410 Base excision repair
kornec03420 Nucleotide excision repair
kornec03440 Homologous recombination

Sequences

Nucleotide sequence (GC-content: 44.8 %):

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ATGAAGCAAATTTCAATTGATATTGAAACTTATTCCAGCACCAACCTAAATCAGACTGGCGTCTATCGATACGCTGATAGCGATGATTTTGAGCTTTTGCTCTTTGGTTATGCTACCGACTTTGGCCCCGTCAAGGTGGTGGACTTAACCCAGGGTGAAAAGATTCCACCACAGATTATTGAAGCCCTAGATAACCCCAACATTATTAAGAGTGCTTTTAATGCTCAATTTGAACGAGTCTGTCTGTCACGTTATGTTGGTCACCGCTTAAAACCAGCTGGTTGGCATTGTTCTCGCGTTTGGTCTGCCACTCTTGGCTTGCCATTATCACTACGAGATGTCGGAAGCATGCTAGGACTACCACGTCAAAAGATCACTGCTGGTAAAGAGCTTGTTCGCTACTTTTGCACCCCTTGTAAGCCCACGAAGGCCAATCAAAATCGCACTCGTAACTTTCCCTACCATGCTCCCGATAAATGGCAACAATTTAAGCAATACAATCAGCGTGACGTCGAGGTTGAAATGGAAATCACCCAGAAACTCGAACGCTTTCCCGTCCCACAAAATGAATGGGAAAACTACTGGATGGATCAAAACATTAATGATCGCGGTATCCGGATTGACCAACAATTAGTTAATAATGCGATCAAATGTCAAAACGTCTTCCATGACCAGTACTTACAAACTGCTAAAAAATTAACGGGTCTAGCAAATCCTAACTCTCCTTTGCAACTAAAAGACTGGCTCCATCAGCAAGGCATTAAAACTGATTCACTATCCAAAGCATCAGTGGCACAGCTATTACAAACCACTACCGGCACGGTCCATCAAGTATTAGCTCTCCGCCAGTTGTTATCTAAATCAAGTATCAAAAAGTATCAGGCTATGCAGAAAGCTATGTGCCAAGATGGTCGTGTCCATGGTCTTTTACAATTTTATGGTGCTAACCGGACGGGTCGGTGGGCTGGTCGCCTTGTACAAGTACAAAATCTTCCCCGTAATTCAATGCCAGACCTCGAAGAAGCTCGCGAATTAGTTAAGCAAGGCAACGTACCAGCACTTGCAATGCTTTATGATTCAGTGCCAGACGTCTTATCACAATTGATTCGCACTGCTTTTATCCCTAGCAAAAATCATCATTTCTACGTGGCTGACTTCTCAGCGGTTGAAGCACGGGTGATTGCTTGGCTATCTAATGAAAAATGGCGACAAGAATCCTTTGCCAAGAATGAAGATATCTATTGTGCATCCGCAAGCCAGATGTTTGGTGTCCCGGTGGTCAAACATGGAATCAATGGTGAACTCCGTCAAAAGGGTAAAATTGCGGAACTCGCCCTGGGCTATGGCGGTTCTATTGGTGCGCTCAAAGCCATGGGTGCCACTAATCTTGGCCTAACCGATGATGAATTACCACCACTGGTTCAAATGTGGCGTAATGCTAGTCCTCACATTGTGCAGTTTTGGTGGGACGTTGATAAAGCAGCTAAAGAATGTATTAAAACGCACCTCCCGCAAACTCCCCACGGAATGAAGTTTATTTACCGGAGTGGCTGCATGTTTCTTCGTTTACGGTCGGGACGTTATCTTTGCTACCCCCAACCTAAAATTGGCATTAACCGGTTTGGTTCTGAATCGATTACCTTCATGGGGAACAACACCGTGAAAAAATGGGATCGAATTGAAACCTATGGGGCCAAGCTGGTAGAAAACATTGTCCAAGCAACTAGTCGGGACTTGTTAGCCGGGGCTATGCGTCGCTTAGAAACAGCTGGTAATCCTGTCGTAATGCACATTCATGATGAAGCCGTGATTGATGCTCCGACAGACCGCTCGCTCGACACAATAGTTAAGATTATGACCGAAGTCCCTGACTGGGCTGATGGCTTAATCCTCAACGCTGCTGGTTTTGTTAGCGACTTTTACAAAAAAGATTAA

Protein sequence:

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MKQISIDIETYSSTNLNQTGVYRYADSDDFELLLFGYATDFGPVKVVDLTQGEKIPPQIIEALDNPNIIKSAFNAQFERVCLSRYVGHRLKPAGWHCSRVWSATLGLPLSLRDVGSMLGLPRQKITAGKELVRYFCTPCKPTKANQNRTRNFPYHAPDKWQQFKQYNQRDVEVEMEITQKLERFPVPQNEWENYWMDQNINDRGIRIDQQLVNNAIKCQNVFHDQYLQTAKKLTGLANPNSPLQLKDWLHQQGIKTDSLSKASVAQLLQTTTGTVHQVLALRQLLSKSSIKKYQAMQKAMCQDGRVHGLLQFYGANRTGRWAGRLVQVQNLPRNSMPDLEEARELVKQGNVPALAMLYDSVPDVLSQLIRTAFIPSKNHHFYVADFSAVEARVIAWLSNEKWRQESFAKNEDIYCASASQMFGVPVVKHGINGELRQKGKIAELALGYGGSIGALKAMGATNLGLTDDELPPLVQMWRNASPHIVQFWWDVDKAAKECIKTHLPQTPHGMKFIYRSGCMFLRLRSGRYLCYPQPKIGINRFGSESITFMGNNTVKKWDRIETYGAKLVENIVQATSRDLLAGAMRRLETAGNPVVMHIHDEAVIDAPTDRSLDTIVKIMTEVPDWADGLILNAAGFVSDFYKKD

GenBank Info

locus_tag - FAM19471-i1-1.1_000951
inference - COORDINATES: similar to AA sequence:RefSeq:WP_008817754.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - DNA polymerase
protein_id - extdb:FAM19471-i1-1.1_000951

Gene locus (click to toggle display options) expand

Located on scaffold FAM19471-i1-1_scf0015

Update range to 10000 bp
FAM19471-i1-1.1_000950
FAM19471-i1-1.1_000952