locus tag: FAM19471-i1-1.1_000930 genome: FAM19471-i1-1.1
species: Limosilactobacillus fermentum taxid: 1613

Annotations

Type Name Description Pathways
Ortholog
 N0.HOG0000045 IS30 family transposase, partial
Gene Product
 IS30 family transposase
Eggnog Ortholog
 EO:1TRSF
Eggnog Description
 ED:PFAM Integrase

Sequences

Nucleotide sequence (GC-content: 49.5 %):

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GCATCAAACGTAAGAGTCACGGGGCTCGTGGCTTTGCCCGTAAGCTCCGTCACCGTGGTAAAACCCGAAAGGTCAAGGGAACCATTAAGGAACGTCGAGGACGATTTAACGACGTCCCTTCCGTTCATGAACGCCCGGTTTCATGTGAGAATCGAAGCCGGTTTGGTCATTGGGAAGGTGATACAATTCGCGGTAAAACCGGGCGTTCAGCCCTGGTAACCTTAGTGGACCGTAAATCTCGGTATTTATTATCTCAGCGCGTTCTCAAAGTAAACGCCAAGAACGTCACACAAGCGATGATTGACCTCCTGCATACCGTAACGCCTAAACGCGTTCGGACGCTTACGCCGGACCGTGGAACTGAATTCGCAGGATACCGTGAAGTTAGCCAAGAACTAAGCATTCCAGTCTATTTTCCCGATCCCCATGCGCCCCAACAACGGGGAACCAATGAGAATACCAACGGGCTTATCCGTGAGTATTTCCCCAAAGGAACCGACCTAGACCAACTAACTGATCAAGATATCGACAAGTTTGTCAGGGATTTAAATCACCGACCACGTAAGGTCTTAGGCTGGAAGAGTCCATTTGAAGTTTTCTTCGGGACAAAGTTGCGCTTGATTTGA

Protein sequence:

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IKRKSHGARGFARKLRHRGKTRKVKGTIKERRGRFNDVPSVHERPVSCENRSRFGHWEGDTIRGKTGRSALVTLVDRKSRYLLSQRVLKVNAKNVTQAMIDLLHTVTPKRVRTLTPDRGTEFAGYREVSQELSIPVYFPDPHAPQQRGTNENTNGLIREYFPKGTDLDQLTDQDIDKFVRDLNHRPRKVLGWKSPFEVFFGTKLRLI

GenBank Info

locus_tag - FAM19471-i1-1.1_000930
inference - COORDINATES: similar to AA sequence:RefSeq:WP_017866971.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 3
transl_table - 11
product - IS30 family transposase
protein_id - extdb:FAM19471-i1-1.1_000930

Gene locus (click to toggle display options) expand

Located on scaffold FAM19471-i1-1_scf0014

Update range to 10000 bp
FAM19471-i1-1.1_000929
FAM19471-i1-1.1_000931