locus tag: FAM19471-i1-1.1_000916 genome: FAM19471-i1-1.1
species: Limosilactobacillus fermentum taxid: 1613

Annotations

Type Name Description Pathways
Gene Code
 pgmB
Gene Product
 beta-phosphoglucomutase
KEGG reaction
 R11310 beta-D-glucose 1,6-phosphomutase; beta-D-Glucose 1-phosphate <=> D-Glucose 6-phosphate kornec00500
KEGG reaction
 R02778 Trehalose-6-phosphate phosphohydrolase; alpha,alpha'-Trehalose 6-phosphate + H2O <=> alpha,alpha-Trehalose + Orthophosphate kornec00500 kornec01100 kornec01110
KEGG reaction
 R02728 beta-D-Glucose 1-phosphate 1,6-phosphomutase; beta-D-Glucose 1-phosphate <=> beta-D-Glucose 6-phosphate
KEGG reaction
 R02727 alpha,alpha-Trehalose:orthophosphate beta-D-glucosyltransferase; alpha,alpha-Trehalose + Orthophosphate <=> D-Glucose + beta-D-Glucose 1-phosphate kornec00500 kornec01100 kornec01110
KEGG reaction
 R00010 alpha,alpha-trehalose glucohydrolase; alpha,alpha-Trehalose + H2O <=> 2 D-Glucose kornec00500 kornec01100 kornec01110
Ortholog
 N0.HOG0000303 beta-phosphoglucomutase
KEGG gene
 K05342 treP; alpha,alpha-trehalose phosphorylase [EC:2.4.1.64] kornec00500 kornec01100 kornec01110
KEGG gene
 K01838 pgmB; beta-phosphoglucomutase [EC:5.4.2.6] kornec00500
KEGG gene
 K01194 TREH, treA, treF; alpha,alpha-trehalase [EC:3.2.1.28] kornec00500 kornec01100 kornec01110
KEGG gene
 K01087 otsB; trehalose 6-phosphate phosphatase [EC:3.1.3.12] kornec00500 kornec01100 kornec01110
Gene Ontology
 GO:1901576 organic substance biosynthetic process
Gene Ontology
 GO:0071944 cell periphery
Gene Ontology
 GO:0071704 organic substance metabolic process
Gene Ontology
 GO:0051716 cellular response to stimulus
Gene Ontology
 GO:0051704 multi-organism process
Gene Ontology
 GO:0050896 response to stimulus
Gene Ontology
 GO:0046872 metal ion binding
Gene Ontology
 GO:0046677 response to antibiotic
Gene Ontology
 GO:0046351 disaccharide biosynthetic process
Gene Ontology
 GO:0044764 multi-organism cellular process
Gene Ontology
 GO:0044464 obsolete cell part
Gene Ontology
 GO:0044444 obsolete cytoplasmic part
Gene Ontology
 GO:0044424 obsolete intracellular part
Gene Ontology
 GO:0044262 cellular carbohydrate metabolic process
Gene Ontology
 GO:0044249 cellular biosynthetic process
Gene Ontology
 GO:0044238 primary metabolic process
Gene Ontology
 GO:0044237 cellular metabolic process
Gene Ontology
 GO:0043169 cation binding
Gene Ontology
 GO:0043167 ion binding
Gene Ontology
 GO:0042578 phosphoric ester hydrolase activity
Gene Ontology
 GO:0042221 response to chemical
Gene Ontology
 GO:0040007 growth
Gene Ontology
 GO:0034637 cellular carbohydrate biosynthetic process
Gene Ontology
 GO:0033554 cellular response to stress
Gene Ontology
 GO:0030312 external encapsulating structure
Gene Ontology
 GO:0019203 carbohydrate phosphatase activity
Gene Ontology
 GO:0016868 intramolecular transferase activity, phosphotransferases
Gene Ontology
 GO:0016866 intramolecular transferase activity
Gene Ontology
 GO:0016853 isomerase activity
Gene Ontology
 GO:0016791 phosphatase activity
Gene Ontology
 GO:0016788 hydrolase activity, acting on ester bonds
Gene Ontology
 GO:0016787 hydrolase activity
Gene Ontology
 GO:0016311 dephosphorylation
Gene Ontology
 GO:0016051 carbohydrate biosynthetic process
Gene Ontology
 GO:0016020 membrane
Gene Ontology
 GO:0009987 cellular process
Gene Ontology
 GO:0009312 oligosaccharide biosynthetic process
Gene Ontology
 GO:0009311 oligosaccharide metabolic process
Gene Ontology
 GO:0009294 DNA mediated transformation
Gene Ontology
 GO:0009292 genetic transfer
Gene Ontology
 GO:0009058 biosynthetic process
Gene Ontology
 GO:0008801 beta-phosphoglucomutase activity
Gene Ontology
 GO:0008152 metabolic process
Gene Ontology
 GO:0008150 biological_process
Gene Ontology
 GO:0006974 cellular response to DNA damage stimulus
Gene Ontology
 GO:0006950 response to stress
Gene Ontology
 GO:0006796 phosphate-containing compound metabolic process
Gene Ontology
 GO:0006793 phosphorus metabolic process
Gene Ontology
 GO:0005992 trehalose biosynthetic process
Gene Ontology
 GO:0005991 trehalose metabolic process
Gene Ontology
 GO:0005984 disaccharide metabolic process
Gene Ontology
 GO:0005975 carbohydrate metabolic process
Gene Ontology
 GO:0005886 plasma membrane
Gene Ontology
 GO:0005829 cytosol
Gene Ontology
 GO:0005737 cytoplasm
Gene Ontology
 GO:0005623 obsolete cell
Gene Ontology
 GO:0005622 intracellular anatomical structure
Gene Ontology
 GO:0005618 cell wall
Gene Ontology
 GO:0005576 extracellular region
Gene Ontology
 GO:0005575 cellular_component
Gene Ontology
 GO:0005488 binding
Gene Ontology
 GO:0004805 trehalose-phosphatase activity
Gene Ontology
 GO:0003824 catalytic activity
Gene Ontology
 GO:0003674 molecular_function
Gene Ontology
 GO:0000287 magnesium ion binding
Eggnog Protein
 EP:pgmB
Eggnog Ortholog
 EO:1UY8N
Eggnog Description
 ED:beta-phosphoglucomutase
EC Number
 EC:5.4.2.6 beta-phosphoglucomutase; beta-pgm (gene name) kornec00500
EC Number
 EC:3.2.1.28 alpha,alpha-trehalase; trehalase kornec00500 kornec01100 kornec01110
EC Number
 EC:3.1.3.12 trehalose-phosphatase; trehalose 6-phosphatase; trehalose 6-phosphate phosphatase; trehalose-6-phosphate phosphohydrolase kornec00500 kornec01100 kornec01110
EC Number
 EC:2.4.1.64 alpha,alpha-trehalose phosphorylase; trehalose phosphorylase kornec00500 kornec01100 kornec01110

Occurs in the following pathway maps:

Pathway Description
kornec00500 Starch and sucrose metabolism
kornec01100 Metabolic pathways
kornec01110 Biosynthesis of secondary metabolites

Sequences

Nucleotide sequence (GC-content: 62.8 %):

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ATGAACTTTGCAGATATTGCCGGCTTTGCCTTTGACTTAGACGGGGTGATCGCCGACACCGCCCGCTTTCACACCCAGGCCTGGCACGAACTGGCCGACCAGGTCCAGACGTCCTGGACGCCGGAACTGGAGGCGAGCCTCAAGGGAGTTGGCCGGATGGATTCCTTGGAGCTGATCCTAAAGGCAGGCGGCCACCAGGGTGAGTACAGCCAGGAAGAAAAGGTCGCCCTGGCCACCAGCAAGAACGACCGCTACCAAGAGCTGGTCAAGACCCTGACGCCGTCAGACGCCCTGCCGGGGATGCCGGCCTTCTTAGCCGAACTCCAGGCCGCCGGCTACCGGCTGGTCTTAGCTTCGGCTTCCAAGAACGCGCCGACGGTCCTCAAGTACCTGCAGTTAGAAGACGTCTTTGAAGGGGTGGTCGACCCCGCTAGCGTCGCCCACGGCAAGCCGGCGCCCGATATCTATTTGGCCGCCGCCGAGATGTTAGACCTTGCCCCCGCCCAGGTTGCCGGCGTGGAAGACGCCCAGGCCGGGGTTGCCGCCATTAACGCGGCCGGCGAGCTGTCGATCGGAATTGGACCGGCCAGCGACCTCAAGGAAGCGGCGGCCCGCTTTGATCGTACCGACCAGGTTAGCTTGGCTAAGCTGAAGGAACGGTTGAGTTAA

Protein sequence:

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MNFADIAGFAFDLDGVIADTARFHTQAWHELADQVQTSWTPELEASLKGVGRMDSLELILKAGGHQGEYSQEEKVALATSKNDRYQELVKTLTPSDALPGMPAFLAELQAAGYRLVLASASKNAPTVLKYLQLEDVFEGVVDPASVAHGKPAPDIYLAAAEMLDLAPAQVAGVEDAQAGVAAINAAGELSIGIGPASDLKEAAARFDRTDQVSLAKLKERLS

GenBank Info

gene - pgmB
locus_tag - FAM19471-i1-1.1_000916
EC_number - 5.4.2.6
inference - COORDINATES: similar to AA sequence:RefSeq:WP_003682323.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - beta-phosphoglucomutase
protein_id - extdb:FAM19471-i1-1.1_000916

Gene locus (click to toggle display options) expand

Located on scaffold FAM19471-i1-1_scf0014

Update range to 10000 bp

Cellular location expand

Responsible annotations:
SL-0041: GO:0005618 cell wall
SL-0162: GO:0016020 membrane
SL-0229: GO:0005622 intracellular anatomical structure
SL-0243: GO:0005576 extracellular region
SL-0086: GO:0005737 cytoplasm
SL-0039: GO:0005886 plasma membrane
SL-0091: GO:0005829 cytosol
FAM19471-i1-1.1_000915
FAM19471-i1-1.1_000917