locus tag: FAM19471-i1-1.1_000911 genome: FAM19471-i1-1.1
species: Limosilactobacillus fermentum taxid: 1613

Annotations

Type Name Description Pathways
Gene Product
 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
KEGG reaction
 R05052 L-erythro-4-hydroxyglutamate:2-oxoglutarate aminotransferase; L-erythro-4-Hydroxyglutamate + 2-Oxoglutarate <=> (4R)-4-Hydroxy-2-oxoglutarate + L-Glutamate kornec01100 kornec00330
KEGG reaction
 R04467 N6-Acetyl-LL-2,6-diaminoheptanedioate + 2-Oxoglutarate <=> N-Acetyl-L-2-amino-6-oxopimelate + L-Glutamate kornec01230 kornec01100 kornec01110 kornec00300
KEGG reaction
 R02619 3-sulfino-L-alanine:2-oxoglutarate aminotransferase; 3-Sulfino-L-alanine + 2-Oxoglutarate <=> 3-Sulfinylpyruvate + L-Glutamate kornec01100 kornec00270
KEGG reaction
 R02433 L-cysteate:2-oxoglutarate aminotransferase; L-Cysteate + 2-Oxoglutarate <=> 3-Sulfopyruvate + L-Glutamate kornec01100 kornec00270
KEGG reaction
 R00896 L-cysteine:2-oxoglutarate aminotransferase; L-Cysteine + 2-Oxoglutarate <=> Mercaptopyruvate + Glutamate kornec01100 kornec00270
KEGG reaction
 R00734 L-tyrosine:2-oxoglutarate aminotransferase; L-Tyrosine + 2-Oxoglutarate <=> 3-(4-Hydroxyphenyl)pyruvate + L-Glutamate kornec00400 kornec01230 kornec01100 kornec00130 kornec00401 kornec01110 kornec00950 kornec00350 kornec01210
KEGG reaction
 R00694 L-Phenylalanine:2-oxoglutarate aminotransferase; L-Phenylalanine + 2-Oxoglutarate <=> Phenylpyruvate + L-Glutamate kornec00400 kornec01230 kornec00360 kornec01100 kornec00960 kornec01110 kornec01210
KEGG reaction
 R00355 L-Aspartate:2-oxoglutarate aminotransferase; L-Aspartate + 2-Oxoglutarate <=> Oxaloacetate + L-Glutamate kornec01230 kornec01200 kornec01100 kornec00250 kornec00220 kornec01110 kornec01120 kornec00710 kornec01210
Ortholog
 N0.HOG0000302 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
KEGG gene
 K10907 K10907; aminotransferase [EC:2.6.1.-]
KEGG gene
 K00841 patA; aminotransferase [EC:2.6.1.-] kornec01230 kornec01100 kornec01110 kornec00300
KEGG gene
 K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] kornec00400 kornec01230 kornec00360 kornec01100 kornec00250 kornec00220 kornec00960 kornec00270 kornec00330 kornec00401 kornec01110 kornec00950 kornec00350 kornec01210
Eggnog Protein
 EP:patA
Eggnog Ortholog
 EO:1TP0J
Eggnog Description
 ED:Aminotransferase
EC Number
 EC:2.6.1.1 aspartate transaminase; glutamic-oxaloacetic transaminase; glutamic-aspartic transaminase; transaminase A; AAT; AspT; 2-oxoglutarate-glutamate aminotransferase; aspartate alpha-ketoglutarate transaminase; aspartate aminotransferase; aspartate-2-oxoglutarate transaminase; aspartic acid aminotransferase; aspartic aminotransferase; aspartyl aminotransferase; AST (ambiguous); glutamate-oxalacetate aminotransferase; glutamate-oxalate transaminase; glutamic-aspartic aminotransferase; glutamic-oxalacetic transaminase; glutamic oxalic transaminase; GOT (enzyme) [ambiguous]; L-aspartate transaminase; L-aspartate-alpha-ketoglutarate transaminase; L-aspartate-2-ketoglutarate aminotransferase; L-aspartate-2-oxoglutarate aminotransferase; L-aspartate-2-oxoglutarate-transaminase; L-aspartic aminotransferase; oxaloacetate-aspartate aminotransferase; oxaloacetate transferase; aspartate:2-oxoglutarate aminotransferase; glutamate oxaloacetate transaminase kornec00400 kornec00360 kornec01100 kornec00250 kornec00220 kornec00960 kornec00270 kornec00330 kornec00401 kornec01110 kornec00950 kornec01120 kornec00710 kornec00350

Occurs in the following pathway maps:

Pathway Description
kornec00130 Ubiquinone and other terpenoid-quinone biosynthesis
kornec00220 Arginine biosynthesis
kornec00250 Alanine, aspartate and glutamate metabolism
kornec00270 Cysteine and methionine metabolism
kornec00300 Lysine biosynthesis
kornec00330 Arginine and proline metabolism
kornec00350 Tyrosine metabolism
kornec00360 Phenylalanine metabolism
kornec00400 Phenylalanine, tyrosine and tryptophan biosynthesis
kornec00401 Novobiocin biosynthesis
kornec00710 Carbon fixation in photosynthetic organisms
kornec00950 Isoquinoline alkaloid biosynthesis
kornec00960 Tropane, piperidine and pyridine alkaloid biosynthesis
kornec01100 Metabolic pathways
kornec01110 Biosynthesis of secondary metabolites
kornec01120 Microbial metabolism in diverse environments
kornec01200 Carbon metabolism
kornec01210 2-Oxocarboxylic acid metabolism
kornec01230 Biosynthesis of amino acids

Sequences

Nucleotide sequence (GC-content: 58.8 %):

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ATGCCGAAGATGAACCCAGCCCTCCGTGGTCGCTTTAATCATGATTTAACCAGCATCGCCCCTTCCAACATCCGGACCTTTGACGCGGAAGTCTCGTCAATCAAAGGAATTGTCAAACTGACCTTGGGGGAGCCGGACTTCAACGTTCCGACCGCCCTCAAAAACGCCGCCATTCAGGCAATTGAAGGTAACGACTCCCACTACACACCCAGCGTGGGAACGGCGGTGTTGCGCGAGGCAATCGCCCACTTCCTTTCCGATCGCTACGACCTAACTTACGACCCCGCCACCGAAATTGCGGTCACGGTCGGGGCGACCGAGGCGATCTTCGCCAGCTTCGAGGCGCTTTTAAACCCCGGTGACAAGGTCATCATCCCGACCCCGACCTTCCCGCTTTACGAGACGGTGGTCCAAATGCTCGGTGCCACCCCGGTCCTGGTTGACACCAGCGCCACCGACTTCGTCCTCACCCCGGCCCTGTTAGAGGAGACGCTCGTAAAAGAGGGGCCGGTCAAAGCCCTGCTCTTAAACTACCCGTCCAATCCAACCGGGGTCACTTACGACGCCGCACAACTCCAGGACCTAGCGGCGGTTATCGAACCGACCGACCTCTTCGTGATCGCCGATGAAATCTACTCCGAATTGATTTACAGCGGTCACCACGCCTCCATTGCCACCTACCTACCGGGCCAAACCCTGGTCTTAAACGGGGCCTCCAAGTCCCACGCCATGACTGGTTACCGAATCGGCTTCGTGGCCGGGCCGGCGGAGCTAATGAAGGTCGTTTCGATGGTGCACTCAATGCTAGTAACCTCCCCGTCCAACCCGGCCATGGCCGCCGCCGTGCCGGCCTTCGGTTCTGAAGAGGGGCGCCAGGCTACTTTAACCATGAAACAAGCCTACCAAGAACGGCGTGACTTCATGCTCCAAGCTTTAAGCCAAGCCGGTTTTAAGGTTGCCAGCCCCAACGGCGCCTTTTACCTCTTCGCTAAGCTACCAACTAAGTTTGGCCAAGACGACGAGGCCTTTGCCACCGCCCTCGCTAAGGAAGGGGCGGTCGCCGTCATCCCCGGTTCCTTCTTTGGCCCCGGTGGTGAAGGCTACCTGCGCCTCTCATACGCCACCAGCATGGACAACCTGAAGCTCGCCGCCAGCCGTATCCAAGACTTTGTCGCCAGCCACTAA

Protein sequence:

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MPKMNPALRGRFNHDLTSIAPSNIRTFDAEVSSIKGIVKLTLGEPDFNVPTALKNAAIQAIEGNDSHYTPSVGTAVLREAIAHFLSDRYDLTYDPATEIAVTVGATEAIFASFEALLNPGDKVIIPTPTFPLYETVVQMLGATPVLVDTSATDFVLTPALLEETLVKEGPVKALLLNYPSNPTGVTYDAAQLQDLAAVIEPTDLFVIADEIYSELIYSGHHASIATYLPGQTLVLNGASKSHAMTGYRIGFVAGPAELMKVVSMVHSMLVTSPSNPAMAAAVPAFGSEEGRQATLTMKQAYQERRDFMLQALSQAGFKVASPNGAFYLFAKLPTKFGQDDEAFATALAKEGAVAVIPGSFFGPGGEGYLRLSYATSMDNLKLAASRIQDFVASH

GenBank Info

locus_tag - FAM19471-i1-1.1_000911
inference - COORDINATES: similar to AA sequence:RefSeq:WP_012390668.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
protein_id - extdb:FAM19471-i1-1.1_000911

Gene locus (click to toggle display options) expand

Located on scaffold FAM19471-i1-1_scf0014

Update range to 10000 bp
FAM19471-i1-1.1_000910
FAM19471-i1-1.1_000912