Annotations

Type Name Description Pathways
Gene Product
TraM recognition domain-containing protein
Ortholog
N0.HOG0005711 TraM recognition domain-containing protein
Eggnog Ortholog
EO:2GNQ7
Eggnog Description
ED:Type IV secretory pathway VirD4

Sequences

Nucleotide sequence (GC-content: 69.1 %):

ATGAGCACGCAGCGCCAGTCCGGCTCGATGGGTGACGAGCTGACGAACATCCTCATGGTCGGGCTCGCCGCCCTCTTCGGCCTCATCCTCGCCATCCGCGGCGCAGGGTCCGTTGCTGCATTCGTGACCGGCACCGACCAACCACAGACAGGCATCGCCGGTGGGCTGGCGGTCCTGTTCAGCCCCGGAGATCCCGCGGGCGCGCTCCACGCCGACGGACTCAACCCCATCGCCTACTGGATCACCCTGACGCTCATGCTCGGCCTCCTCGGAGCCGCAGGGACCTGGGGGTGGATCAAGTGGCGACGACACTCCCGCGCGGTCGATATGGACCCACACCGGTTGGCGGGCACGGCCACAAGCCACGAAGTCGCCACCGCAGCCTCCGCGAATACACTCGTCCGCCACGCCGGGACACTCCGCCCGTCCCTCAACAGCCCACAACCTCACGATGTGGGGTTCCTGCTCGGCCAGTCGAAGGGCAAACAGGTGTGGGCCAGCGTCGAGGACTCCATCCTCCTCATCGGCCCGCCCCGCTCCGGCAAGGGCCTACACATCGTCATCCCCGCGATCCTCGACGCACCCGGTGCCGTGGTCACCACCAGCACCCGGCCCGACAACCTCACCGCCACACTCAAGGCCCGGCAGCAGATCGGGCCAGTCGCCGTCTTCGACCCCCAACACTTGGCCGACGGCGTTCCCGCAGGTCTTCGCTGGTCACCCATCCGCGGCTGCGACGACCCACTCACCGCCATGATCCGCGCCACCGGGCTCGCCGCCGCGACCGGCCTCGCCGACGGCGGGGTCGACGGAGGCGGATTCTGGGAAGGCAAGACCCGAGTCGCCCTCCAAGCACTCCTGCATGCCGCCGCACTGGATCACCGCACACCCGCCGAACTGTTCCGCTGGACCCTCGACCCCTCCGCCGCGGCAGACGCCGTCGCCATCCTCACCGGTTCACCCCACTCAGCGACCGGCTGGGCCGAATCCCTGGAAGCCATGATCGACGCCGACCCCCGCACCCGCGACTCCATCTGGCAAGGCGTCTCCCTCGCCCTGGCGGCCCTGGCCGACCCCCGCGTCCTCGACGCTGTCAGTCCCGGGCCCGGTGAGCAGTTCGATCCCGAAGCCTTCATCCGCGACAAGGGCATCCTCTACCTGCTCGCCACCGGCGCCGGGGCAGGCAACAGTGCCGCACTCGTCGCCGCGTTCGTGGAAGACCTCGTCGAAACCGCCCGACGTATGGCCGCCCGCAGCCCGGGCGCACGGCTCGACCCACCACTCCTTCTCGCACTGGACGAGATCGGCAACCTCGCACCCCTCCCGTCACTCCCGACCCTGATGGCAGAAGGCGGCGGCACCGGGATCACGACCATGCCCGTCCTCCAGTCCCTGGCCCAGGCCAGGGACAAGTGGAGCGAGAACCAGGCCGGAGCCATCTGGGACGCCAGCATCGTCAAGATCATCCTCGGCGGCGCCTCCAACAGTCGCGACCTTCAAGACCTCGCCACCCTCATCGGCGAACGCGACGAGTACACCGACGCCATCACCCTCGGCGACCACGGCACCCGCTCAAACCAGCGCTCCGTACGCCGGGTGCCGATCCTGCCACCCGACCGCATCCGCACCCTCCCATTCGGCACCGGCGTCATCCTCCTACGCTCCACACCGCCGATCATCACCGACCTACATCCCTGGCCCAAACGCGGCGACGCTGTACAGCTTCAACGCGACCGGGAAGGTATCGAGGCCCTCCTGCAACGGCCACCCAGCACCGAGTAG

Protein sequence:

MSTQRQSGSMGDELTNILMVGLAALFGLILAIRGAGSVAAFVTGTDQPQTGIAGGLAVLFSPGDPAGALHADGLNPIAYWITLTLMLGLLGAAGTWGWIKWRRHSRAVDMDPHRLAGTATSHEVATAASANTLVRHAGTLRPSLNSPQPHDVGFLLGQSKGKQVWASVEDSILLIGPPRSGKGLHIVIPAILDAPGAVVTTSTRPDNLTATLKARQQIGPVAVFDPQHLADGVPAGLRWSPIRGCDDPLTAMIRATGLAAATGLADGGVDGGGFWEGKTRVALQALLHAAALDHRTPAELFRWTLDPSAAADAVAILTGSPHSATGWAESLEAMIDADPRTRDSIWQGVSLALAALADPRVLDAVSPGPGEQFDPEAFIRDKGILYLLATGAGAGNSAALVAAFVEDLVETARRMAARSPGARLDPPLLLALDEIGNLAPLPSLPTLMAEGGGTGITTMPVLQSLAQARDKWSENQAGAIWDASIVKIILGGASNSRDLQDLATLIGERDEYTDAITLGDHGTRSNQRSVRRVPILPPDRIRTLPFGTGVILLRSTPPIITDLHPWPKRGDAVQLQRDREGIEALLQRPPSTE

GenBank Info

locus_tag - FAM19038-p1-1.1_002635
inference - COORDINATES: similar to AA sequence:RefSeq:WP_015582353.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - TraM recognition domain-containing protein
protein_id - extdb:FAM19038-p1-1.1_002635

Gene locus (click to toggle display options) expand

Located on scaffold FAM19038-p1-1_scf0001

Update range to 10000 bp

FAM19038-p1-1.1_002634
FAM19038-p1-1.1_002636