locus tag: FAM19038-p1-1.1_002627 genome: FAM19038-p1-1.1
species: Acidipropionibacterium thoenii DSM 20276 taxid: 1122998

Annotations

Type Name Description Pathways
Gene Product
 hypothetical protein
Ortholog
 N0.HOG0001582 hypothetical protein FAM19038-p1-1.1_002627
KEGG gene
 K20945 vpsU; tyrosine-protein phosphatase [EC:3.1.3.48] kornec05111
KEGG gene
 K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48] kornec02020
Gene Ontology
 GO:1901576 organic substance biosynthetic process
Gene Ontology
 GO:1901564 organonitrogen compound metabolic process
Gene Ontology
 GO:1901137 carbohydrate derivative biosynthetic process
Gene Ontology
 GO:1901135 carbohydrate derivative metabolic process
Gene Ontology
 GO:0140096 catalytic activity, acting on a protein
Gene Ontology
 GO:0071704 organic substance metabolic process
Gene Ontology
 GO:0046377 colanic acid metabolic process
Gene Ontology
 GO:0044267 cellular protein metabolic process
Gene Ontology
 GO:0044264 cellular polysaccharide metabolic process
Gene Ontology
 GO:0044262 cellular carbohydrate metabolic process
Gene Ontology
 GO:0044260 cellular macromolecule metabolic process
Gene Ontology
 GO:0044249 cellular biosynthetic process
Gene Ontology
 GO:0044238 primary metabolic process
Gene Ontology
 GO:0044237 cellular metabolic process
Gene Ontology
 GO:0043412 macromolecule modification
Gene Ontology
 GO:0043170 macromolecule metabolic process
Gene Ontology
 GO:0042578 phosphoric ester hydrolase activity
Gene Ontology
 GO:0036211 protein modification process
Gene Ontology
 GO:0035335 peptidyl-tyrosine dephosphorylation
Gene Ontology
 GO:0034645 cellular macromolecule biosynthetic process
Gene Ontology
 GO:0034637 cellular carbohydrate biosynthetic process
Gene Ontology
 GO:0033692 cellular polysaccharide biosynthetic process
Gene Ontology
 GO:0019538 protein metabolic process
Gene Ontology
 GO:0016791 phosphatase activity
Gene Ontology
 GO:0016788 hydrolase activity, acting on ester bonds
Gene Ontology
 GO:0016787 hydrolase activity
Gene Ontology
 GO:0016311 dephosphorylation
Gene Ontology
 GO:0016051 carbohydrate biosynthetic process
Gene Ontology
 GO:0009987 cellular process
Gene Ontology
 GO:0009242 colanic acid biosynthetic process
Gene Ontology
 GO:0009059 macromolecule biosynthetic process
Gene Ontology
 GO:0009058 biosynthetic process
Gene Ontology
 GO:0008152 metabolic process
Gene Ontology
 GO:0008150 biological_process
Gene Ontology
 GO:0006807 nitrogen compound metabolic process
Gene Ontology
 GO:0006796 phosphate-containing compound metabolic process
Gene Ontology
 GO:0006793 phosphorus metabolic process
Gene Ontology
 GO:0006470 protein dephosphorylation
Gene Ontology
 GO:0006464 cellular protein modification process
Gene Ontology
 GO:0005976 polysaccharide metabolic process
Gene Ontology
 GO:0005975 carbohydrate metabolic process
Gene Ontology
 GO:0004725 protein tyrosine phosphatase activity
Gene Ontology
 GO:0004721 phosphoprotein phosphatase activity
Gene Ontology
 GO:0003824 catalytic activity
Gene Ontology
 GO:0003674 molecular_function
Gene Ontology
 GO:0000271 polysaccharide biosynthetic process
Eggnog Protein
 EP:ptpA
Eggnog Ortholog
 EO:2IM0Q
Eggnog Description
 ED:Low molecular weight phosphatase family
EC Number
 EC:3.1.3.48 protein-tyrosine-phosphatase; phosphotyrosine phosphatase; phosphoprotein phosphatase (phosphotyrosine); phosphotyrosine histone phosphatase; protein phosphotyrosine phosphatase; tyrosylprotein phosphatase; phosphotyrosine protein phosphatase; phosphotyrosylprotein phosphatase; tyrosine O-phosphate phosphatase; PPT-phosphatase; PTPase; [phosphotyrosine]protein phosphatase; PTP-phosphatase

Occurs in the following pathway maps:

Pathway Description
kornec02020 Two-component system
kornec05111 Biofilm formation - Vibrio cholerae

Sequences

Nucleotide sequence (GC-content: 66.8 %):

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ATGGAGTCGGGGTTTCGGGTGGTGTTCGTGTGCACGGGGAACACGTGCCGCTCGCCGATAGCCGCCCGCGTCCTCATCGACTATCTCCGCTCGGCTGGGCTAGATGACTCGTGCACGGTCTCGTCGCGGGGCGTTCGCGTTTTGGTCGGGGGGGGTGCGCCGATGGATCTGCGGGCCGTGCGCGCCCTGACTGGGCGCGGCATCGACCCCGGCGACGACCATCATGTTAGGCCGCTCCAGACGAGCGACGTCGGCGAGGCCGATCTGTTCGTCGCCCTCGACCACAGTCACGCCGACCGTCTGCGTGAACTCGGGGCTCCGAACGACCACGTACTACTGCTGGGAGGGTTCGATCCGGAATCGGACGCGCCGGTGGATGTCGCCGATCCGTTCGAGTCCGACCAGGGCGCCTATGAGCACACCCTGACTCGGATCATGTGGTGCATGCTCGGCTTGATGGCGGAGATCCGCGACCGCCTCCGCGTTGAGCCGACGGGTGATGAGCCTATGTCAGGTGGTGCGGGAGCGTTCGATCCCGCACACCAGAGCAGCGAGCGCTGA

Protein sequence:

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MESGFRVVFVCTGNTCRSPIAARVLIDYLRSAGLDDSCTVSSRGVRVLVGGGAPMDLRAVRALTGRGIDPGDDHHVRPLQTSDVGEADLFVALDHSHADRLRELGAPNDHVLLLGGFDPESDAPVDVADPFESDQGAYEHTLTRIMWCMLGLMAEIRDRLRVEPTGDEPMSGGAGAFDPAHQSSER

GenBank Info

locus_tag - FAM19038-p1-1.1_002627
inference - COORDINATES: protein motif:HMM:NF013607.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - hypothetical protein
protein_id - extdb:FAM19038-p1-1.1_002627

Gene locus (click to toggle display options) expand

Located on scaffold FAM19038-p1-1_scf0001

Update range to 10000 bp
FAM19038-p1-1.1_002626
FAM19038-p1-1.1_002628