FAM19038-p1-1.1_002621

Annotations

Type	Name	Description
Gene Product	helix-turn-helix domain-containing protein
Ortholog	N0.HOG0002792	helix-turn-helix domain-containing protein
KEGG gene	K07110	ramB; XRE family transcriptional regulator, fatty acid utilization regulator
KEGG gene	K03088	rpoE; RNA polymerase sigma-70 factor, ECF subfamily
Eggnog Ortholog	EO:2I3S1
Eggnog Description	ED:Cupin domain

Sequences

Nucleotide sequence (GC-content: 66.5 %):

ATGGATGTGAGTGCGGAGTCGTTGGCGCGTGCGATCGGTACGCGAGTCAAGCAGCAGCGCAAAGACCGGGGATGGACTCTCGATCAGCTCGCCGAGTTCGCTGGGGTGAGCCGCCGCATGCTCGTGAACGTCGAGCAAGGTGCCGTGAATCCGAGCGTGGGCGCGCTGTTGCGGCTCTCAGATGCGCTCAGGGTGGGCCTTCCGGCTCTTGTGGAGCCTCCGGCCTCGCGTGCAGCGAAGCTCACTCGCAATGGACAGGGCGCTGTCCTCTGGACTGGCGACGCAGGGGGCCAGGGTGTGCTGGTTGCGGGCACGGAGCCGCCGGATGTGGTCGAGTTGTGGGACTGGACGCTCGCGCCGGGTGAGCGGCACGACAGTGAGGCGCACAGCCACGGCACCCGTGAGCTCCTGCACGTCCAGGAGGGAACGGTCACGGTCGAAGTCGACGGCGATCGCTATGACCTCGCACCCGGCGACGCTCTGTCGTTCCACGGCGATGCTCCCCATGCCTATATCAACTCGACCGATGCTTCTACCCGGTTCTCGCTGACGGTGTTCGAGCCGGGCGTGGGAGCCGCACACCGAACGGAGACCCCGAATGCCTGA

Protein sequence:

MDVSAESLARAIGTRVKQQRKDRGWTLDQLAEFAGVSRRMLVNVEQGAVNPSVGALLRLSDALRVGLPALVEPPASRAAKLTRNGQGAVLWTGDAGGQGVLVAGTEPPDVVELWDWTLAPGERHDSEAHSHGTRELLHVQEGTVTVEVDGDRYDLAPGDALSFHGDAPHAYINSTDASTRFSLTVFEPGVGAAHRTETPNA

GenBank Info

locus_tag - FAM19038-p1-1.1_002621
inference - COORDINATES: similar to AA sequence:RefSeq:WP_018778447.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - helix-turn-helix domain-containing protein
protein_id - extdb:FAM19038-p1-1.1_002621

Gene locus (click to toggle display options)

Located on scaffold FAM19038-p1-1_scf0001

Set range around gene locus Update range to 10000 bp

Render method