Annotations

Type Name Description Pathways
Gene Product
helix-turn-helix transcriptional regulator
Ortholog
N0.HOG0005657 helix-turn-helix transcriptional regulator
Eggnog Ortholog
EO:2GUVX
Eggnog Description
ED:helix_turn_helix

Sequences

Nucleotide sequence (GC-content: 71.1 %):

ATGAGCGAGGACGATCGTCGCGATGCCCGGCCCGATCACCCCAGCGCCGAGCGCGCGCTGGCGATGCTCAAGGTGCTGACTCAACCGGTCCGCCAGAAGATCGTGCGGACCCTGATGGTCGCCGATGCGATGCGGGTCTCAGACATCGCCGCGGCCATCGGGGAGCCGGCCAACTCGGTCTCCTACCACCTTCGCCAGCTCGCCAGGATCGGCGTCGCCCACACCACCGAGCCCCCCGGCGACCGCGACAGCAGGGAGACCTGGTGGGTGATCGACGACTGGCACGGCATGAGCATCGCCCCGAGCCAGATTCGGGCGCTGCCCGGCGGCGACGTCGTGCTGGCGGCCCTGGACCGGGTCGACAGCCCCGAGATCACCAGCATCTTCTCCATGGAGCGCGCGGCCGCCGCGGAGGCCTCCGGACAGCCGGGGTTGCGGATGGACGGCCCTCTGCTGCTGACCGGCGAAGAGGCCCGGGAGCTCGTCGACGCCGTCGAGGCGCTGTTCTCGGCGGCGGCGGCCACCTCCCACCGGCACCGACTCGACCACGACCAGGGGGTCGAGGGGTTCGACTACCGGGTCGCGGTGATGCCGGCGAACTCGTCGCAGACCTTGACCAGCTCGGAGGTGAGCAGGGGCTCGAAGGCCGAGTGA

Protein sequence:

MSEDDRRDARPDHPSAERALAMLKVLTQPVRQKIVRTLMVADAMRVSDIAAAIGEPANSVSYHLRQLARIGVAHTTEPPGDRDSRETWWVIDDWHGMSIAPSQIRALPGGDVVLAALDRVDSPEITSIFSMERAAAAEASGQPGLRMDGPLLLTGEEARELVDAVEALFSAAAATSHRHRLDHDQGVEGFDYRVAVMPANSSQTLTSSEVSRGSKAE

GenBank Info

locus_tag - FAM19038-p1-1.1_002561
inference - COORDINATES: protein motif:HMM:NF024248.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - helix-turn-helix transcriptional regulator
protein_id - extdb:FAM19038-p1-1.1_002561

Gene locus (click to toggle display options) expand

Located on scaffold FAM19038-p1-1_scf0001

Update range to 10000 bp

FAM19038-p1-1.1_002560
FAM19038-p1-1.1_002562